Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6206 |
Symbol | |
ID | 7975096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 937006 |
End bp | 937992 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644796776 |
Product | quinone oxidoreductase, YhdH/YhfP family |
Protein accession | YP_002948035 |
Protein GI | 239820850 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.599678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTCC AAGCACTGCT CGCCAGCAAG ACAGGCGACA AGATCACCAC CCGCGTGGTC TCGTTGAGCG AACAAGACCT CATGCCCGGG GACGTCGTGG TCGACGTCGA CTACTCCAAC GTCAACTACA AGGACGCAAT GGCCATCACC GGCCGCGCGG AGGTCATCCG CCAGTTCCCG TTGATTCCCG GCATCGACTT TGCCGGCACG GTCAGGACTT CTTCCTACCC TGGCATCGCT GCTGGCGACC GCGTCGTCGC CAATGGCTGG GGCTTGAGCC AAACCCACCA CGGTGGCTAT GCGCAGCAGG CGCGCGTGAA GGGCGAATGG CTGGTCAAGC TTCCGGCAGC CTTGTCCACC AAGGACGCGA TGGCCATCGG AACGGCGGGG TACACGGCGA TGCTCTCCGT GCTGGCGCTC GAGCACGGCG GGCTCACGCC CCAGCATGGC GACGTTCTCG TGACGGGCGC CAATGGCGGC GTCGGTTCCA TCGCCATTGC CCTCTTGTCC GGTCTCGGCT ACCAGGTCGT TGCCTCCACA GGGCGACTGG AGGAAGGCGG CTATCTGCGC AAGCTGGGGG CCGCCGAGAT CATCGATCGC CGGACGCTGT CGGAGCCGGG GGCGCCGATC GCCCGCGAAA GATGGGCCGG TGCCGTCGAC TCGGTCGGCA GCCACACACT GGCCAACGTG CTGGCGCAGA CAAAGTATCG AGGCGTGGTC ACCGCTTGCG GCCTGGCCCA GGGCACCGAT CTTCCGGCCT CGGTGCTGCC ATTCATCCTG CGCAATGTGA CGCTGGCCGG CATCGATTCG GTCAATGCGC CCCAACAGGT GCGCATCGAG GCTTGGTCGC GGCTGGCGCG GGACCTGGAT CTGGACAAGC TCGCGCAAGC GACGCATGTG GTCGGCCTTG CCGAGGTGCC TGCAGCCGTC GAGCGATTGT TCGCAGGAAA AGTCCAGGGC CGTACGGTTG TCGACGTCAA CGCATGA
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Protein sequence | MTFQALLASK TGDKITTRVV SLSEQDLMPG DVVVDVDYSN VNYKDAMAIT GRAEVIRQFP LIPGIDFAGT VRTSSYPGIA AGDRVVANGW GLSQTHHGGY AQQARVKGEW LVKLPAALST KDAMAIGTAG YTAMLSVLAL EHGGLTPQHG DVLVTGANGG VGSIAIALLS GLGYQVVAST GRLEEGGYLR KLGAAEIIDR RTLSEPGAPI ARERWAGAVD SVGSHTLANV LAQTKYRGVV TACGLAQGTD LPASVLPFIL RNVTLAGIDS VNAPQQVRIE AWSRLARDLD LDKLAQATHV VGLAEVPAAV ERLFAGKVQG RTVVDVNA
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