Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_6191 |
Symbol | |
ID | 7975081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 924572 |
End bp | 925489 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644796761 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002948020 |
Protein GI | 239820835 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.395168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGA TCGAAGACCT TCGCTTGGCT GCCGCGCTGC TGCGCGAGAG CTCGCTCAGC GCGGCCGCGC GCTCGCTCGG CGTCACGCCG CCCGCGCTGT CGATGCGCCT GCGCAAGCTC GAGGCCTCGC TGGGCCTGGT GCTGGCCAAC CGCACGTCGC GCAAGCTGCA CCTAACCTCG GAAGGCGAAC GATTCGGGCG CGAGGCCTAT GAACTCCTGC TGAAGTTCGA CGGCCTGCGC GAATCCCTGC AGCGCGATGA CCGGCGCCTG AGCGGAACGC TGCGCGTGGC CGCGTCCTTC GGCTATGGCC GCACGCATGT CGCGCCGTGG CTGTCCCGTT TCTCCCGCCT GCATCCGGCC CTGCGGCTGC AGCTGGACCT GCGTGAAACG CCGTGGCCCG ACAAGCACGA TTCCGACGCG GTGGTGCACG TGGGCGCGGT GCGCGACTCG TCCTGGGTGG CGCACCCGCT CGCCTCCAAC GAACGCTGGC TGTGCGCGAG CCCCGGCTAC CTGCGCGAGC ACGGCACGCC CCGCAACCCG GCGGACCTGG CCTACCACGC CTGCATCTGC ATCCGCGAGA ACGACGAGGA CGTGACGCTG TGGCACATGC GGCCCGCGGG CAGCGGCGCC CGCAAGGGCG AGACGCTGCG CATCAACCCG GCCTTCGTCA GCAACGACGG CAGCGTGGCG CGCCAGTGGG CCGAGGACGG CCTCGGTATC GTGCTGCGCT CCCAATGGGA CGCCGCCGAA GCGCTGGCCG CCGGCCGCCT CGAGCGCGTG ATGGCGGACT GGGAATTCGG CGCCGCCCCG GTGGTGGTGC TCGTGCCCAC GCGCAAGGGG CGCAGCGCGC GGGTGCAGGC GCTGGTCAGC TTCCTGGTGG AAGCGGCGGG GGCAGCGGGC CGGCCGAGCG CTGGGTGA
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Protein sequence | MMQIEDLRLA AALLRESSLS AAARSLGVTP PALSMRLRKL EASLGLVLAN RTSRKLHLTS EGERFGREAY ELLLKFDGLR ESLQRDDRRL SGTLRVAASF GYGRTHVAPW LSRFSRLHPA LRLQLDLRET PWPDKHDSDA VVHVGAVRDS SWVAHPLASN ERWLCASPGY LREHGTPRNP ADLAYHACIC IRENDEDVTL WHMRPAGSGA RKGETLRINP AFVSNDGSVA RQWAEDGLGI VLRSQWDAAE ALAAGRLERV MADWEFGAAP VVVLVPTRKG RSARVQALVS FLVEAAGAAG RPSAG
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