| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6170 |
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| Symbol | |
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| ID | 7975060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 899378 |
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| End bp | 904624 |
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| Gene Length | 5247 bp |
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| Protein Length | 1748 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796740 |
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| Product | multi-sensor signal transduction multi-kinase |
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| Protein accession | YP_002947999 |
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| Protein GI | 239820814 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACAAG AAGAACTCAG CGAGCGCCGC CAGGCAGAGA TCCCGGACAG CACCCTTTAC
CTCGATCGCG CGGAAACCGA GCCCGCACAC GGCCGTCTGC ATATTTTTGC TGCGGTACAG
GAGACCGTCG AACAGCAGTT CTCCGGTGCA GGCCTGCTTT CGCGGGATTT TTACGACCTG
GGCACAGGCA CGCCGCGCCT GGAACGCGCC AGCGCCGCCG GCTGCGCATC CTGGCTTGTT
GCAGGGCGCG GCCAGGTCGC CCCGGCCACA CTGGCCACGC TCCAGCGCGA ATATGCGTTC
CGCAGCGCCT TGCACGAGAA CTGGGCCGCG GTGCCGATGG CGCTGGTGCC GCACGGCGAA
GGGGCGCTGC TGGTTCTCAA AGACCCGGGC GGCGAACTGC TGCGCCGGAC CGCCCGGCCG
GTCCGCAACA TGGAAGCATT CGTTGCGCTG GCACTCCAGC TCACCGCCGC CGTGCAGGCC
ATGCACGCGG CAGGCGTGAT GCACCGTGCG CTGACGCCCG ATCGCCTGCT GTGCACGCCC
GGCGCAAGCG CCTACCTGAC GGGTTTCGGC TACGCAGCGC GGCTCGATGC GGACAACGGC
GTGCCGGCCG AAGGCAGCCT GGCATGGGAC GAGGACAGCT TCGACTACAT GGCGCCCGAA
CTCGGCGGGC GCATGAACAT TCGCGTCGAT GCGCGCGCCG ATCTTTACTC CCTCGGCTGC
ATCCTCTACG AACTGCTGGC CGGCAGGCCT CCCTTCCAGG GCGAAGACGT TGCGGAACGG
ATCCACGCGC ATGCGACGCA AAAGCCCCGC CCGCCCGGCG AACTGCGAGA GGGCGTCCCC
GCGCAACTGT CGCTGCTGGT CCTGAAGCTT CTCGAGAAAG CGCCCGATCA CCGCTATGGC
AGCGCTGCGA GCGTGCTCGC GGACCTGCGC CACTGCGAGA CGCTGCAGCG CCAGCGGGGA
TGCATTCCGC CCTTCGCGCT CGACGCCCAC GCCACGCTGC ACAGGATGCT GCGCACGCAG
CAGGTGCTGG GCCGCGATGC CGAGCTGCAG ATGCTGGACG CGCTCTACCG CGAAGTCGCG
GGCAGTGCGC GATCGCGCGT CGCCTGGGTC TCGGGCCCAT CGGGCATCGG CAAATCGATA
CTGCTGCGCG AGGCGGTGGC GCGCATCCAG CAATCGGGCA CGCCGCTGCT GGCGGCGGTC
AAGAGCGAGG AAGGCAGCCT CGGCAGGCCC TACGCGGTGC TGGTGCAGGC GCTCGAGCAG
CTGCTGCAGT TCGTGCTCGG CTGCCCCGAG GACGAGTTCG CGATTTGGCA GGACCGGATC
CGCGCCGCCA CGAACGCGGT CGATCGCACC CTCGCCGGCT TCCTGCCCTC CCTGGCCCTG
GTGCTCGGCC CGCAGGCCGA GACGCCCGAA TCACCAGACA CCGCACCCGC GATCGAACGG
GAGCGCGTGC TCCACGGCAT GGCACGCCTG CTGGCCTGCT TTGCAACGGC CGCGCGGCCC
CTGCTGCTGT GGCTGGACGA CCTGCAATGG GCGGATGCGG GAACCCTGCA GGTGCTCGAG
CGCCTGCTTC ACCAGTATCC CGGCAAGGCG CTGCTGCTGG TCGGCGCGTT CCGCGCCAAG
GAGGTGGACG CGAACCATCC GCTGCGCACG GGCCGGCTTG CCGAAGTGCC CGACGCGGCA
ACCATGGAAC TCGGCCCGCT CGACGAGGGC GCCCTGCGCG AACTGATCGC GCAGGCACTG
CAGCAGGATG CCGATGCGCT CGGTCCGCTG GCCGAGGTGA TCGGCCGCAA GACCCGGCGC
AACCCGTTCT TTGCCCAGCA CCTGCTCGGG CTCCTCGCCG ACGACGGCCT GCTTGCCTAC
GATGCGCAGG CCGCGGCCTG GCGCTGGAGC CTGGAGCGCA TCGCGGCCCA TCCGGGCATC
GACAATGTCG TCGACCTGCT GGCGCGCCGC TTCGAACAGC TGCCGGGCCC CACGCAATCC
GTGCTGCAGC TGCTTTCCTG CCTTGGCCAC CGTGCCTCGG GCGAAGCGCT CGCCGTCGCC
GCGGGCCTGG CCTCCGGCGC CGACGCGCTG CGCAGCCTCG AAGCGGCGCT CGAACCGGCG
CTGCAGGCCG GCAGCGTCTG CCGCGAGGAC GGTGACTGGG TGTTCTGCCA CGATCGCTTC
CGCGAAGCGG CCTACGCCTC GATCCCGCCG GAGGAGCGCG CACCGCTGCA CCTGCAGGTC
GCGCGCCGCC AGCTTGCGCA CCCGGCCATG TCGGCGCAGG TGTTCGCGAT TGCCGCGCAG
GCCGGGCTCG CGCGGCCGGC GGTCGATGCG CCCCACGAGC GGCGCCGCTT CGCCAGGCTC
AACCTCGAGG CCGGACGCCA GGCCAAGGCC GCAACGGCAC ACCATTCGGC CCTGGGCTTC
TTCCGCGCCG CGCTCGACTT CCTCGGCGAG GACGATGTCA GCGAGGACGG CCTTGCCGCG
CGCGCCTCGT GCGGCGAGGC CGAATTCATG ACCGGTGCGC TCGAAGTCGC CGAGGCGCGC
CTGGCGGCAC TGGAGCAGGT GGCGGGCGAC GGCATCTTCG GCGCGGACCT GGCGCGCCTG
CGGGCCGCGC TCTACACCAC GCTCGGCCGC TTCGACCTGG CGCTGGGCGT CGGGCTGGCG
TTCCTGCGCA AGTCGGGCAT CCACGTGCCG ATGCAGCCCG ACGACGCCGC CGTCGACCGC
GAATACGCGC AGCTCCAGGC GTGGCTCGAG CGCCATGGCA TGGACGCGCT GCGGCAGCTG
CCGGTCGCGA CCGATCCGCT GCGCCGCGCC ATCACCAACA TCTTTGCCGA CCTCATTCCG
CCGGCGCTGT ATACCGACCA GAACCTGGTC GACCTGATCC TGCTGCGCAT GGCCAACCTC
GGGATCGTGC ACGGCCACAC GGATGCCTCG GCGGACGGGT ACGTGTGCAT GACGCAGGTC
TTCGGCGTGC GCTATGGCAA CTACGCCGCG GCGCGCGAGT TCGGCGCGCT GGCACTGCAC
CTGGTCGACG AGCGCGGCCT CGTCCGCTAC CGCGGCCGCG TCCACATGGC CTTCGGCACC
ATGATCGTGC CCTGGACGCA ACCCGCCCGC GCGGCGCGCG ACTACATCCG CCGCGCCTAC
AAGGTTTTGG TGGAGACCGC GGACCATACC TTCGCGATCT ACTGCGCCCC CAACGAGGCC
TCCGGCATGT TGTTCGCGGG CGAATTCCTG GGCGAGGTGC GCGACACGGT CGAGCGCGGC
CTGGCCATCG CGCGCGACGC GAATTTCCAG TTCGTGGTCG ATGCGCTGCT GTCCCAGAAA
CTGCTGCTGG CACGGCTGCA GGACGGCACC CGCGGCGACC CCGGCGAAGC GCCGCGCCTG
CCCCCGGAAG GCGCGCCGCC CACGCTGGTG GACTTCGAAT ACTGGGTGTA CCGGCTGGAG
GGCGCGCTGC TGTGCGGCGA GCTCGCGGAG GCGCTCGAGG CCCGTGGCCG CGCCGAGGCC
TGTGCGTCGG CGGGACGCAC CTTTGCCGAG AGCGGCGAAC TGCCGTACTA CGGCGCGCTG
GCGCTGCTCG CGCTGCCCGC GCGCAACGCC GCGCAGCAGG CGGCGCTGCA GCGCGACGTG
GACCAGCTTG CCGCCTGGGC CCTGGCCTGC CCCGACAACT TCTCGGCCCG CTTCGAGCTG
GTGCGCGCCG AGCTGGCCCG CGTCGACGGC AGGCCGCTCG AAGCGAGCGA GGCCTATGCG
CACGCGGTGT CGAAGGCCCG CCGCAACGGC TTCACGCAGG TCGAGGCGCT GGCCGCCGAA
CTGGCCGCCG CCTTCCACGC CGGCCGCGGG GATGAACTGT CCGCGCACGG CCACCTGCGC
TACGCACGCG GCGCATGGCA GCGCTGGGGC GCCACGGCCA AGGTGCGGCA GCTGCAGGCC
GCCCATCCCG CGGTGTTCGA GCAAGACGCA TGGGCGCCCG CCGCGAGCCG CCTCCAGGCG
CTCGACGCGC AGGCCGTGCT GCGCATCTCG ACAGCGCTCG CGAGCGACAT CGTTCCCGCG
CGGCTGGTGG AAACGCTGCT GCGCACCGCG CTAGAGAGTG CCGGCGCCGG CTACGGCACG
CTGACGCTGC TGCGCCAGGG CGCCTGGCAG GTGCGCGCGC AGGCCCAGGT GCTGGATGGC
GCCATCTCGG TGACGCAGGA GCCGGTCGCG CTCGGCAGCG GCACCTGCCC GGTATCGATC
GTGCAGTCCG TCGCGCGCAC CCAGCAGCGC ATCGTGGTGG GCGATGCGCG CGAGGAGCCG
TCCCTGGCCC AGGACGACTA CGTGCGCCGC CGGCGGCCGC GCTCGGTCCT GTGCGTGCCG
TTGATGCGCC ATGCGACGCT CATCGGCGTG CTGTACCTCG AGAACAACCT TGCGGCCCAC
GTCTTCACGC AATCCAAGGC CGAGGTGCTG GAAGTGATCG CCTCGCATGC GGCCTTCGCG
CTGGAGAACG CCCGCCTCTA CGAAGAGCTG CTCGAACAGA ACCACCAGCG CGCCCTTGCC
GAAGAAGAAC TGCGCGGGGC GCTTGCCGAA CTCGAGCGCG CGAGCCGCCT GAAGGCCATG
GGCGAACTGG TGGCGTCCAT CGTCCACGAG ATCGGCCAGC CGATCGCGGC CGTCGACACC
TCCGCCAGCG CCGCGCTGCG CTGGCTCGAT CGCAGCACGC CGGATATTTC GGAAGCGCGC
GAGATGCTCA TCCACATCAG CAAGAGCGCG CTGCGGGCCC GCACCATCAT CCAGGGCCTG
CGGGCCAAGG CGCGCAAGGC CGAGCCGCAG TTTGCGGTGT TCGACCTCAA CGAAGCACTG
CGCGAAGCGG TGACGCTGGT TGCCGGCCCG CTCGAATCGC TGGGCATCGT GCTCGAGCTG
CAGGGCCTGG ACGCGCCGGA GCCGGTCTAC GGCGACCGCG TCCAGCTGCA GCAGGTTGCC
GTGAACCTGC TGATGAACGG CGCCGAATCG ATGACGGGGC TCGAGCACGG CACACCGCGG
CGGCTGCTGC TGGCATGCGC GAGCGACCAG GAAGGCCGCG TGCGCGTCGC GGTGGACGAC
GTCGGCACCG GCATCGGCGC CGAGGACGCC GACCGGCTGC TGCAGCCCCT CTTCAGCACC
AAGGCCAACG GCATGGGCAT GGGCCTGGCG ATCTGCAAGT CGATCCTCGA TGCGCACGAC
GGGACGCTGG CCCTGCTGCC GCGCGAGACG GTGGGCACGC GTGCCGTATT CACGCTGCCG
CGCCCCGATC CGGTGCAACC GACCTGA
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| Protein sequence | MRQEELSERR QAEIPDSTLY LDRAETEPAH GRLHIFAAVQ ETVEQQFSGA GLLSRDFYDL
GTGTPRLERA SAAGCASWLV AGRGQVAPAT LATLQREYAF RSALHENWAA VPMALVPHGE
GALLVLKDPG GELLRRTARP VRNMEAFVAL ALQLTAAVQA MHAAGVMHRA LTPDRLLCTP
GASAYLTGFG YAARLDADNG VPAEGSLAWD EDSFDYMAPE LGGRMNIRVD ARADLYSLGC
ILYELLAGRP PFQGEDVAER IHAHATQKPR PPGELREGVP AQLSLLVLKL LEKAPDHRYG
SAASVLADLR HCETLQRQRG CIPPFALDAH ATLHRMLRTQ QVLGRDAELQ MLDALYREVA
GSARSRVAWV SGPSGIGKSI LLREAVARIQ QSGTPLLAAV KSEEGSLGRP YAVLVQALEQ
LLQFVLGCPE DEFAIWQDRI RAATNAVDRT LAGFLPSLAL VLGPQAETPE SPDTAPAIER
ERVLHGMARL LACFATAARP LLLWLDDLQW ADAGTLQVLE RLLHQYPGKA LLLVGAFRAK
EVDANHPLRT GRLAEVPDAA TMELGPLDEG ALRELIAQAL QQDADALGPL AEVIGRKTRR
NPFFAQHLLG LLADDGLLAY DAQAAAWRWS LERIAAHPGI DNVVDLLARR FEQLPGPTQS
VLQLLSCLGH RASGEALAVA AGLASGADAL RSLEAALEPA LQAGSVCRED GDWVFCHDRF
REAAYASIPP EERAPLHLQV ARRQLAHPAM SAQVFAIAAQ AGLARPAVDA PHERRRFARL
NLEAGRQAKA ATAHHSALGF FRAALDFLGE DDVSEDGLAA RASCGEAEFM TGALEVAEAR
LAALEQVAGD GIFGADLARL RAALYTTLGR FDLALGVGLA FLRKSGIHVP MQPDDAAVDR
EYAQLQAWLE RHGMDALRQL PVATDPLRRA ITNIFADLIP PALYTDQNLV DLILLRMANL
GIVHGHTDAS ADGYVCMTQV FGVRYGNYAA AREFGALALH LVDERGLVRY RGRVHMAFGT
MIVPWTQPAR AARDYIRRAY KVLVETADHT FAIYCAPNEA SGMLFAGEFL GEVRDTVERG
LAIARDANFQ FVVDALLSQK LLLARLQDGT RGDPGEAPRL PPEGAPPTLV DFEYWVYRLE
GALLCGELAE ALEARGRAEA CASAGRTFAE SGELPYYGAL ALLALPARNA AQQAALQRDV
DQLAAWALAC PDNFSARFEL VRAELARVDG RPLEASEAYA HAVSKARRNG FTQVEALAAE
LAAAFHAGRG DELSAHGHLR YARGAWQRWG ATAKVRQLQA AHPAVFEQDA WAPAASRLQA
LDAQAVLRIS TALASDIVPA RLVETLLRTA LESAGAGYGT LTLLRQGAWQ VRAQAQVLDG
AISVTQEPVA LGSGTCPVSI VQSVARTQQR IVVGDAREEP SLAQDDYVRR RRPRSVLCVP
LMRHATLIGV LYLENNLAAH VFTQSKAEVL EVIASHAAFA LENARLYEEL LEQNHQRALA
EEELRGALAE LERASRLKAM GELVASIVHE IGQPIAAVDT SASAALRWLD RSTPDISEAR
EMLIHISKSA LRARTIIQGL RAKARKAEPQ FAVFDLNEAL REAVTLVAGP LESLGIVLEL
QGLDAPEPVY GDRVQLQQVA VNLLMNGAES MTGLEHGTPR RLLLACASDQ EGRVRVAVDD
VGTGIGAEDA DRLLQPLFST KANGMGMGLA ICKSILDAHD GTLALLPRET VGTRAVFTLP
RPDPVQPT
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