| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6156 |
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| Symbol | |
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| ID | 7975032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 879372 |
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| End bp | 880601 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796711 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_002947985 |
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| Protein GI | 239820800 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CCAAGGGGCC GCTGTCGCAC GTCAAGGTGC TGGACCTCAG CCGCATCCTC
GCCGCACCCT GGGCCAGCCA GATCCTCGCC GACCTGGGCG CAGAAGTGAT CAAGGTCGAG
CGGCCCGGCG CGGGCGACGA CACGCGCAGC TGGGGCCCTC CGTTCCTGAA GGATGCCGCA
GGCCAGGATA CGAAGGAGGC GGGCTACTAT CTGGCCGTCA ACCGCGGCAA GCGCTCGATC
ACCGTGAGCC TCGACAAGCC GGAAGGCCAG AAGATCATCA AGGAACTCGC CATGCGGGCC
GACATCGTGC TCGAGAACTA CAAGGCCGGC ACGCTGGCCC GCCATGGCCT GGACGAGGCC
TCGCTGCGCA GGATCAACCC GCGCCTCATC TACTGCTCGG TCACGGGCTT CGGCCAGACG
GGCCCGCGGC GCGACCAGCC GGCCTACGAC TTCCTGATCC AGGCGATGGG CGGCCTGATG
AGCGTCACCG GCGAGAAGGA CGGCCGCCCC GGCGGCGGCC CGCAGAAGGT CGGCATCCCG
ATCGTCGACC TGATGACCGG CATGTACACC GCCGTCGCCG TGCTGGCCGC CCTCGCGCGC
CGCAACGAAA CTGGCGTGGG CGACGCCGTC GACATCGCGA TGCTCGACGT GCAGGTGGCG
GCGCTTTCGA ACCAGGCGAT GAACTACCTG GTGTCGGGCC AGGTGCCGCA GCGCAACGGC
AACGCGCATC CGAACATCCA GCCGCAGGAC GTGTACGGCT GCGCCGACGG CGACGTGATC
CTCGTGGTGG GCAACGACGC GCAGTTCGCC AGGCTCTGCG AAGTGTTCGG GCGAAGCGGC
TGGGCCGCGG ACGAGCGCTT TGCGACCAAC GCGCAGCGGG TCCGCAACAT CGGCGCGCTG
TCCGCGATGC TGCGCGAGGT TTTCGCGACG TGGGAGCGCG GGCCACTGAT TGCCGCGCTC
GACAAGGCCG GCGTGCCCTG CGGTCCGATC AACACGGTTG CCGAAGTGTT CGAGGAGCCG
CAGGTCAAGG CGCGCGGGAT GCTGCGCCAT GTGCCGCATC CGAGCGGCGT CGACACACCG
CAGGTGGCGA GCCCGATGCG TTTTGCACAG GCGGCGCTGC AAACGCAGGC CGCGCCGCCG
CTGCTGGGCC AGCACAGCGA GGACATCCTG TCCGAGCTGG GCTACAGCGC GGCCGGCATC
CACGCGCTGC GCGAAGGCGG AGCGATCTGA
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| Protein sequence | MSTTKGPLSH VKVLDLSRIL AAPWASQILA DLGAEVIKVE RPGAGDDTRS WGPPFLKDAA
GQDTKEAGYY LAVNRGKRSI TVSLDKPEGQ KIIKELAMRA DIVLENYKAG TLARHGLDEA
SLRRINPRLI YCSVTGFGQT GPRRDQPAYD FLIQAMGGLM SVTGEKDGRP GGGPQKVGIP
IVDLMTGMYT AVAVLAALAR RNETGVGDAV DIAMLDVQVA ALSNQAMNYL VSGQVPQRNG
NAHPNIQPQD VYGCADGDVI LVVGNDAQFA RLCEVFGRSG WAADERFATN AQRVRNIGAL
SAMLREVFAT WERGPLIAAL DKAGVPCGPI NTVAEVFEEP QVKARGMLRH VPHPSGVDTP
QVASPMRFAQ AALQTQAAPP LLGQHSEDIL SELGYSAAGI HALREGGAI
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