| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6144 |
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| Symbol | |
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| ID | 7975590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 866250 |
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| End bp | 867155 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796699 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947973 |
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| Protein GI | 239820788 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.185797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGAACA CCACGCCGCA GGCCTTTGCT TCCCGGCAGG CCTTTGCCTC CCAGCAGGTG
TTCGATGCCT GCGCCACGGT CCACTGCGAA GGTGCCTCTG CACCTTCGCC GCGAGAGAGC
CATTCGCGCT GCCTGCATGA ACACGAGCTG CACCTGATCG GCGCACGGCC CGCGCGCCTT
CGCATCGGCG CGGGCGCGGA CCAGGAGACG CACAGCTTCG CACCCGGCAC CGTCGTGCTG
CTCGGTCCGC GGCTGCCGCA CAGCCTCGCG TTCGAGCACC GCGCGCCGCA GGCCGGCAGC
GCAGGCGAAC TGGTGCTGCG CTTCAGCGAC GAGCTGCTGC GCCGCGGCAT GGCGCTTTTT
CCGGAGCTCG GCGATGCCGG TCCGCTGCTG GCGCGCGCGC GCCAGGGCGT GCAGTTCGTC
GGCCTGGGCG CGGACACGCT CGCGCGCCTG CGCCGCATCG AGACGCTGCG CGGGCTTGCG
CGTTTTTCCG AGTTCATCGC GCTGCTGAAC GAGCTCGCGC AATGGCGCGA CTACCGCCTG
CTTGCCGATG TCTTCCTGGC CGATGCCGGC TTCGACGAGG ACGGCCGCGC GCTGCGCATC
CACAAGGCGA TCGACTACAT CCGCGACAAC TACGCCGAGG CGCTGTCGCT GGCCGAGGTC
GGCGCGATCG CGGGCATGCG CGAGAACGCG TTCTCGCGCA GCTTCCGCCG CGCCACCGGC
CAGACCTTCA CCGACTTCGT CAACGGCCTG CGCGTGGCCA GGGCCTGCCG CCTGCTGGCC
TCGACGCGCC AGCAGGTGAG CAGCATCTGC TACGAGGTGG GGTTCAACAA CATCTCGAAT
TTCAACCGGC ACTTCCGCCG GATCCAGGGC ATGACGCCGG GCGAATTCCG CGGCCGCCGG
ATGTGA
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| Protein sequence | MLNTTPQAFA SRQAFASQQV FDACATVHCE GASAPSPRES HSRCLHEHEL HLIGARPARL
RIGAGADQET HSFAPGTVVL LGPRLPHSLA FEHRAPQAGS AGELVLRFSD ELLRRGMALF
PELGDAGPLL ARARQGVQFV GLGADTLARL RRIETLRGLA RFSEFIALLN ELAQWRDYRL
LADVFLADAG FDEDGRALRI HKAIDYIRDN YAEALSLAEV GAIAGMRENA FSRSFRRATG
QTFTDFVNGL RVARACRLLA STRQQVSSIC YEVGFNNISN FNRHFRRIQG MTPGEFRGRR
M
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