| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6102 |
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| Symbol | |
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| ID | 7975548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 817813 |
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| End bp | 818973 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796658 |
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| Product | domain of unknown function DUF1745 |
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| Protein accession | YP_002947932 |
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| Protein GI | 239820747 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3287] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGATA CGGACTGCAT ACGCAAAGCC CACTCCTGCG CGGCGGAGCC CCGCAAAGCC
GCGCAGGAAT TCCATGCGAT GGTGGCGCAG CCCGGCATGG CGCTGGTGAT CTTCTATTGC
TCGAGCGACT ACGACCTCGA GGCGCTGGCC GACGAGATGA AGCGCCTGTT CGGCGAGGTG
CCGGTGGTGG GCTGCACCAC GGCCGGTGAG ATCGGCCCCG CGGGCTTGCG CGACCACAGC
CTCGCGGGTG CGAGTTTTCC GGCCAGCCAC TTCAGAGTGG CGGCAGGCCA GGTCGAGCAG
TTGCAGCAGT TCAAGGTGGA GGCCGGCCAG GACTTCGCCC AGGCGCTGCT GCACAAGCTG
CTGGCCGAGG GCCCGCCCGG CGATGCGGAC CACAGTTTCG CGCTGCTGCT GATCGACGGC
CTGTCGCTGC GCGAGGAACC CGTCACGCGC GCCTTCCAGG CTGCGCTGGG CAGGCTTCCG
CTGCTCGGCG GTTCGGCCGG CGACGGCATG AAGTTCGACC GGACCCAGGT CTACTGGGAC
GGCCGGTTCG GCGTCGACTG CGCGGTGCTG GTGCTGGTGG CCTCGCGCAT GCCGTTTCGC
ATCTTCAAGA CGCAGCACGT CGTCGCCACC GACGAGCGGC TGGTCGTGAC CGAGGCCGAC
GCCGCCTCGC GCACCGTCAA GGAAATCAAC GGCCTGCCGG CCAGCCAGGA GTACGCGAGG
ATGCTCGGCA TCGACGCCTC CGACCTGGAC CCTTCGCGCT TCGCGGCCTG GCCGGTCGTG
CTGACGATCG GCGGCACCAC CTACGTGCGC TCGATCCAGA AGGCCAATGC GGACGGCAGC
CTCACTTTCT TCTGCGCGAT CGAGAACGGG CTGGTGCTGC GCGTGGCCCG GGGCGTGGAC
CTGCTGCAGA ACCTCGAGCA GGCCTTTGCC GGCATACGCG CCGAGATCGG TCCGCCGCAG
CTGGTGCTGG GCTACGACTG CATCCTGCGC AAGCTCGAAA TCGCGCAGAG CAGCGCGAAG
GACCGCATCG GCGAACTGCT GAAGGAGAAC AACACGGTCG GCTTCCATAC CTACGGGGAA
CAGTTCCGCG GCGTGCACGT CAACCAGACG CTGGTCGGCA TTGCATTCGG CACTAACGGC
GAGGGGGCCA GCCATGCGTG A
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| Protein sequence | MTDTDCIRKA HSCAAEPRKA AQEFHAMVAQ PGMALVIFYC SSDYDLEALA DEMKRLFGEV
PVVGCTTAGE IGPAGLRDHS LAGASFPASH FRVAAGQVEQ LQQFKVEAGQ DFAQALLHKL
LAEGPPGDAD HSFALLLIDG LSLREEPVTR AFQAALGRLP LLGGSAGDGM KFDRTQVYWD
GRFGVDCAVL VLVASRMPFR IFKTQHVVAT DERLVVTEAD AASRTVKEIN GLPASQEYAR
MLGIDASDLD PSRFAAWPVV LTIGGTTYVR SIQKANADGS LTFFCAIENG LVLRVARGVD
LLQNLEQAFA GIRAEIGPPQ LVLGYDCILR KLEIAQSSAK DRIGELLKEN NTVGFHTYGE
QFRGVHVNQT LVGIAFGTNG EGASHA
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