| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6090 |
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| Symbol | |
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| ID | 7975536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 807671 |
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| End bp | 808618 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796646 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate binding protein |
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| Protein accession | YP_002947920 |
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| Protein GI | 239820735 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.984063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGA AACTCATTGC CGCCACCGTG CTGGGCCTCA GCCTGGCCGG CGCATCCGTC
GCGCAGGACA TCAACTTCGG CATCATCTCG ACCGAGGCGA CGCAGAACTT GAAGGGCGAC
TGGCAGCCGC TGATCGACGA CATGAGCCGC CAGACGGGCC TCAAGGTCAC GGCCTTCTTT
GCGCCCGACT ACGCCGGCAT CATCGAAGGC ATGCGCTTCA ACAAGGTGCA CATCGGCTGG
TTCGGCAACA AGTCGGCCAT GGAAGCGGTC GACCGCGCGG GCGGCGAAGT GTTCGCGCAA
ATGGTCAACG CCGACGGCAC GCAGGGCTAC TACTCGCACC TGATCGTCAA CCGCGAGAGC
CCGCTCAACA CGCTCGACGA CGTGCTCAAG AACGCGAAGA ACCTGAGCTT CGGCAACGGC
GATCCCAACT CGACCTCGGG CTACCTGGTG CCGGGCTTCT ACGTCTTCGC GCAGAACAAG
CTCGATGCCA AGTCGATCTT CAAGGTCACG CGCAGCGCCA ACCACGAGAC CAACGCGCTG
GCCGTGGCCA ACAAGCAGGT CGACGTGGCC ACCAACAACA GCGAGAACCT CGAGAAGGTG
AAGGAGCGCT TCCCCGAGAA GTTCAAGGAC ATCAAGATCG TCTGGACCTC GCCACTGATT
CCGCTCGACC CGCTCGTCAT GCGCAAGGAC CTGCCCGAGG CGACCAAGGC CAAGCTGCGC
AACTTCTTCT ACAACTACGC CAAGTCCGAT CCGCGCGAGA AGGAGATCGT CATGAAGATC
TCGAAGCTCT CGGGCTTCAA GGAATCGAGC GACAAGCAGC TGCTGCCGAT CCGCCAGCTC
GACCTGTTCG GCCAGCGCAC CAAGATCGAG GCCGACGCCG TGCTCGGCGA CGCCGACAAG
AAGGCCAAGC TGGCCGACAT CGACAAGAAG CTGGCCGCGC TGAACTGA
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| Protein sequence | MIKKLIAATV LGLSLAGASV AQDINFGIIS TEATQNLKGD WQPLIDDMSR QTGLKVTAFF
APDYAGIIEG MRFNKVHIGW FGNKSAMEAV DRAGGEVFAQ MVNADGTQGY YSHLIVNRES
PLNTLDDVLK NAKNLSFGNG DPNSTSGYLV PGFYVFAQNK LDAKSIFKVT RSANHETNAL
AVANKQVDVA TNNSENLEKV KERFPEKFKD IKIVWTSPLI PLDPLVMRKD LPEATKAKLR
NFFYNYAKSD PREKEIVMKI SKLSGFKESS DKQLLPIRQL DLFGQRTKIE ADAVLGDADK
KAKLADIDKK LAALN
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