| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6063 |
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| Symbol | |
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| ID | 7975698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 783739 |
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| End bp | 785079 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796620 |
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| Product | amidohydrolase |
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| Protein accession | YP_002947894 |
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| Protein GI | 239820709 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.233217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTA TTGCATTTAC CAATGTCCGC ATCTTCGACG GCTCGGGCGA AGACCCGTAC
ACCGGCGATC TTCTCGTCGA AGGAAAGCGC ATCATGGAAG TCGTTCGCTT TCCGAAGCGC
GTGAGCACCG ACGACGCGCG CGTGATCGAC GGCAAGGGCC GCTTTCTCAT GCCGGGCATG
ACTGAGGCCC ACACGCACTT CTCCTGGAAC GACCAGCCGT CGCTCGCGGC CATCCAGTTC
ATGCCGCCCG AAGAGCACAT GCTCTGGTGC GTGCGCGTGG CCAAGCGCTA CCTCGACATG
GGATGGACCT CGGCGATCGG CGCGGCAGCG GCCAAGCCAC GGCTGGACGT GGTCTTGCGC
AACGCCATCG ACGCGGGAGA ATTCCCCGGC CCGCGCTACC TGGCGGGCAG CCAGGAGATC
ACCACCATCG GCGCACTGGG TGACAACACG CTGCCGCACA TGAAGTTCGA GGAACTGAGC
TTTGGCAGCG TGTGCAGCGG CCCCGAAGAG ATCCGTAGGT CGGCTCGCAC CTTCATCAAG
TACGGGGTCG ACCACCTGAA GATCAACTTG TCGGGCGAGT ACATCGCAGG CTTGCCGGCG
GAGATGTCGC CGTTTGCGGA AGACGAAGTC GCCATGCTGG CGCAAGAAGC CAAGCGCTAC
GGCAAGCGCA TGGCGGCACA TGCGCGATCG AGCGAGTCGG TCAAACAATG CGTGCGCCAC
GGCATCGAGA TGGTCTACCA CGCGAGCTTT GCCGATTCGG AAGCGCTGGA CATGCTGGAG
GCGGCGAAGG ACCGGCACTT TGTGGCGCCC GGCATCGGCT GGCTCATTCG TACGACCTAC
AACGCGGCTG AATACGGCAT TACCGAGGCC GTGGCGACGC AGATGGGCTA CAAGCGCGAG
CTGGAGATTG CGTCGGCCTC ATTGCGCGAG ATGCACAAGC GCGGCATTCG CATCCTGCCC
GGCGGGGACT ACGGCTTTGC ATGGATGCCG CACGGAACCA ATGCCAACGA CCTCCAGTAC
TTTGTCGACT ACATCGGCAT GACGCCCAAG GAAGCGTTGA TGGCGGCAAC GCGCCTGGGC
GGGCAGATCA TGCAGCGGCC GGATGAGCTC GGACAGTTGA AGGCGGGATT TCTCGCCGAC
ATCGTCCTGG TCGACGGCGA TCCGCTGAAG AACCTGTCGC TGCTGACGGA CCCTGCGAAG
GTGCAATTGG TGATGAAGGA CGGCGTGATC CATAAGGACT GTGCAACACC CGTGCCGTCG
CATGCCGCCC TGCACCTCGA AGGCGGCGAC ACGCCGCTGC GAGAACAGGG TGTCAAGGAG
GCTTTGACGG AAATGAACTG A
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| Protein sequence | MTRIAFTNVR IFDGSGEDPY TGDLLVEGKR IMEVVRFPKR VSTDDARVID GKGRFLMPGM
TEAHTHFSWN DQPSLAAIQF MPPEEHMLWC VRVAKRYLDM GWTSAIGAAA AKPRLDVVLR
NAIDAGEFPG PRYLAGSQEI TTIGALGDNT LPHMKFEELS FGSVCSGPEE IRRSARTFIK
YGVDHLKINL SGEYIAGLPA EMSPFAEDEV AMLAQEAKRY GKRMAAHARS SESVKQCVRH
GIEMVYHASF ADSEALDMLE AAKDRHFVAP GIGWLIRTTY NAAEYGITEA VATQMGYKRE
LEIASASLRE MHKRGIRILP GGDYGFAWMP HGTNANDLQY FVDYIGMTPK EALMAATRLG
GQIMQRPDEL GQLKAGFLAD IVLVDGDPLK NLSLLTDPAK VQLVMKDGVI HKDCATPVPS
HAALHLEGGD TPLREQGVKE ALTEMN
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