| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6030 |
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| Symbol | |
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| ID | 7975315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 754487 |
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| End bp | 755542 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796590 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947864 |
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| Protein GI | 239820679 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.053883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCG TCATTGCCAT CAATTCGCTG ATCGAGTTCA AGGAGACAAA GATGGTGTTC
CACAAAGACA AGAGATTCGT CCTGCGTCTC GCGCTTGCCT GCGCGCTGCT TCCCGCCTTC
GGCGGCGCGC AGGCGCAGTC TGCGCCGGCG GCTGCGTATC CGTCCAAGCC GATCAAGTTC
ATCGTGCCGG TGCCGGCCGG CGGCGCCGCC GACGCCATGG CCCGCATGAT CGCCACGCAC
CTGCAGACCG CGTGGGGCCA GGCCGTGGTG GTCGACAACA AGCCCGGCGC CGGTTCGAGC
GTGGGGATGG CGGTGGTTGC CAAGGCCGCG CCGGACGGCT ACACCATCGG CATGGGCAAT
GTCGCGGCCA ACGCCATCAA CCCCGCCGTG CGGCCCGAGG CCTTCCCCTA CGATCCGGTG
AAGGACTTCG CCGCGGTCAC CATGGTGGGC ATCACGCCGC TGATCCTGGT GGTGAATCCG
CAGAAGGTGC CGGCGCGCAC GCTGCCCGAG TTCCTCGCGT ACCTCAAGGC GCACCCGGGG
CAGCTCAGCT ATGGCTCTTC CGGCGCAGGC TCGGCGCTGC ACGTGGGCAT GGAACTCTTC
CTGCAGAAAA CCGGCACCTC GATGGTCCAT GTCGGCTACA AGGGCTCGGC GCCCATGCTG
ACCGACCTGC TCGGCGGACA GGTCGATGCC GCCATGGATG CGGCCGCCAC CTCCTGGCCG
CAGGTGCAAT CGGGCAAGCT GCGCGCGCTG GGCGTCTCGA CGGCGCAGCG GGTGTTCTTC
GCGCCCGAGC TGCCGCCCAT CGCCGAGTCC GTGAAGGGCT TCGAGATGAA TCCCTGGCAC
GGCGTCATGG CGCCGGCCGG CACGCCGCCC GCCATCGTCG ACAAGCTCGC GGCCGAGATC
CAGGCGTTCC TGCGCCTGCC CGACACCGAA GCCAAGCTGC GCGAGCGCGG CGTGGTGCGC
GTGGGCTCGA GTCCCGCGGA GTTCGCGAAG AGCCTGCGCG ATGAAGCGGC CTTCTACAAG
AAGCTCGCAG CCGACGCGGG CATCAAGGCC GAATGA
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| Protein sequence | MNGVIAINSL IEFKETKMVF HKDKRFVLRL ALACALLPAF GGAQAQSAPA AAYPSKPIKF
IVPVPAGGAA DAMARMIATH LQTAWGQAVV VDNKPGAGSS VGMAVVAKAA PDGYTIGMGN
VAANAINPAV RPEAFPYDPV KDFAAVTMVG ITPLILVVNP QKVPARTLPE FLAYLKAHPG
QLSYGSSGAG SALHVGMELF LQKTGTSMVH VGYKGSAPML TDLLGGQVDA AMDAAATSWP
QVQSGKLRAL GVSTAQRVFF APELPPIAES VKGFEMNPWH GVMAPAGTPP AIVDKLAAEI
QAFLRLPDTE AKLRERGVVR VGSSPAEFAK SLRDEAAFYK KLAADAGIKA E
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