| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6018 |
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| Symbol | |
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| ID | 7975303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 742842 |
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| End bp | 744104 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644796579 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947853 |
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| Protein GI | 239820668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGG CGCCATCGCC TTCGCCGCGC ACCGGACTGG CGCGCCTGCT GCCCGCAGGC
GTCAGCGCCG ACGCACTGCC CCTGCTCGCC GCGCGGGGGC TGCGTGCCTT CGGCGACGGC
TACATGGCGG TGCTGCTGCC GGCCTACCTG CTGTCGATCG GCCTGGGCAC GCTGGAAGTC
GGCATCGTCA GCACTGCAAC CATGCTGGGC TCGGCGCTGG CCACGCTCGC GGTGGGTGCC
TGGGGCTACC GCTTCGCGGG CGGGCGGCTG CTGCGCGGCG CCGCCTTGCT GATGGCCGCG
ACCGGGCTGG GCTTTGCGGG CCTGTCCTCG TTCTGGCCGC TGCTGGTGGT CGCGCTGGTC
GGCACGCTCA ATCCGAGCTC CGGCGACGTC AGCGTGTTCC TTCCGCTCGA GCACGCGCGC
CTCGCGGCGG CCGCGCAGGG CCATGCCCGC ACCTCGCTGT TCGCGCGCTA CAGCCTGCTG
GGTGCCTTGT GCGCAGCGCT GGGCGCGCTC GCGGCCGCCG TGCCCGACTG GCTGGTTCGG
CACAGCCACG TCGCGCGGCC CGACGCGCTG CGCGGCATGT TCGCGGTCTA TGCCGCCATC
GGGCTCGCGG TCTTCTGGCT CTACCGGAAG CTGCCTGACC ACGCCGGCGC CCACGAGGCG
GGCAGCGCAC CCGTGGCACC GGCGCCCCTC GGCCCGTCGC GCCGCGTGGT GGTGCGGCTG
GCGGCGCTCT TCAGCGTCGA TGCCTTTGCC GGCGGCCTGA TGGTCAACGC GCTGATGTCG
CTGTGGCTGC TGGAGCGTTT CGGCTTCTCG CTGACCCAGG CCGGCGTGTT CTTCTTCTGG
ACCGGCCTGC TGGGCGCGGC GTCGCAGCTT GCCGCCCCCG TGGTGGCCCG GCGCATCGGC
CTGCTCAACA CCATGGTCTT CACGCACCTG CCCGCCAACG TCTGCCTGGT GCTGGCCGCG
CTGGCACCGA GCCTGCCGAT CGCGCTCGGC CTGCTGATGG TGCGCAGCGC GCTGTCGTCG
ATGGACGTGC CCACGCGCAC GGCCTACGTG ATGGCGGTCG TGACGCCGCC CGAACGCAGC
GCCGCGGCCA GCTTCACCGC CGTGCCGCGC AGCCTAGCCG CGGCCATCAG CCCGACGCTC
AGCGGCGCGC TGTTCGCGGC CGGATGGATC TCGCTGCCGC TCATAGCCTG CGGGCTGCTC
AAGATCGGCT ACGACCTCGC GCTCTGGCGC GCGATGCGGC GGGACCGGCT CGACGCGGAG
TGA
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| Protein sequence | MNAAPSPSPR TGLARLLPAG VSADALPLLA ARGLRAFGDG YMAVLLPAYL LSIGLGTLEV
GIVSTATMLG SALATLAVGA WGYRFAGGRL LRGAALLMAA TGLGFAGLSS FWPLLVVALV
GTLNPSSGDV SVFLPLEHAR LAAAAQGHAR TSLFARYSLL GALCAALGAL AAAVPDWLVR
HSHVARPDAL RGMFAVYAAI GLAVFWLYRK LPDHAGAHEA GSAPVAPAPL GPSRRVVVRL
AALFSVDAFA GGLMVNALMS LWLLERFGFS LTQAGVFFFW TGLLGAASQL AAPVVARRIG
LLNTMVFTHL PANVCLVLAA LAPSLPIALG LLMVRSALSS MDVPTRTAYV MAVVTPPERS
AAASFTAVPR SLAAAISPTL SGALFAAGWI SLPLIACGLL KIGYDLALWR AMRRDRLDAE
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