| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6006 |
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| Symbol | |
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| ID | 7975291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 729737 |
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| End bp | 730510 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796567 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947841 |
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| Protein GI | 239820656 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGC CTGTGGTGTC GCTCGAGAGC GTGGGCGTGA CGTTCACGGC GGGCCCGGTC
TGGAACCGGC GCTGCGTCGA CGCGGTGCGC GATGTGAGCC TGTGCATCCG AGCCGGTGAA
ACGCTCGGCC TGGTCGGAGA AAGCGGCTCC GGAAAAACGA CGATGGGCCG GCTTCTGCTC
GGGCTGCAGG CCCCCACGCA GGGCGCGGTG CGTTTCCTCG GCGATGTCGT CCCGGCCTCG
CGCCGAGCCC GGCAACTCCT GCTCGCGGGC CGCATGTCGG TGGTGTTGCA GCAGCCGGAA
TGGGCGCTCA ATCCCCGGCT GCGCCTCGGC GTGTCGGTGG CGGAGCCGCT GGCGGTGAGC
GGTGCGGGAA CGCCCCGGGA GCGCCGCGAC CGCGTCGTGC AGACGCTCGC GCTGGTGGGC
CTCAACCCAG GGTTCGCCGA GCGCTTCCCG CACGAGCTTT CCGGTGGCCA GCGCCAGCGG
GTCGCGATCG CGCGGGCGTT GATCACGCAG CCCCGGTTCC TGGTGTTCGA TGAAGCGGTC
AGCGCGCTCG ATGTTTCCGT GCAGGTGCAG ATCCTCAATC TGATTCGTGA CCTGCAGCAG
CGCCACGGCT TTGCCGCCCT CTTCATCTCC CACGACCTGG CAGCCACGCG CTACGTGTGC
AGCCGGATCG CGGTGATGCG CTCGGGAGAA GTGGTCGAGA TCGGCGATGC CGCACGCTTC
TACGAGAAAC CGCACCACGC ATACAGCCAG GCCCTTTGGC AGGCTGCAGC CTGA
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| Protein sequence | MTEPVVSLES VGVTFTAGPV WNRRCVDAVR DVSLCIRAGE TLGLVGESGS GKTTMGRLLL
GLQAPTQGAV RFLGDVVPAS RRARQLLLAG RMSVVLQQPE WALNPRLRLG VSVAEPLAVS
GAGTPRERRD RVVQTLALVG LNPGFAERFP HELSGGQRQR VAIARALITQ PRFLVFDEAV
SALDVSVQVQ ILNLIRDLQQ RHGFAALFIS HDLAATRYVC SRIAVMRSGE VVEIGDAARF
YEKPHHAYSQ ALWQAAA
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