| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5966 |
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| Symbol | |
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| ID | 7975005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 692125 |
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| End bp | 694209 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796529 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_002947803 |
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| Protein GI | 239820618 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.858122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCC CCTCCACCCC CAATCTGCGC ATCGCGGTCG ACATCGGCGG CACCTTCACC
GACATGGCCG CCTTCGACGA GGCCACCGGC AAGCTGCTGT TCGGCAAGGC GCTCTCGACC
CACGGCCAGC TCGTCAATGG CATCCAGGCC ACGCTGGACA GCGCCGACAT CGATGTGCGT
AACGGGCAGC TGTTCCTGCA CGGCTCCACC ATTGCCATCA ACACGCTGCT GGAGCGCACC
GGCGCCAACA CGGCCCTGCT GATCACGGAA GGCTTTCGCG ACATCTACGA GATCGGCCGC
GTCAACCGTC CCGATGCCTA CAACCTGTTC TTCAACAAGC ACCAGCCGCT GGTCAAGCGC
TCGCTGCGCT TCGAGGTGAC CGAGCGCCTG CGCGCCGACG GCAGCTTGCA CAAGCCACTG
GACGAGGGCG CGGTGCGCGA ACTGGCGCGC GAGCTGAAGA GCCAGAACAT CGAAGCGGTG
GCGGTGCTGC TGCTGCACTC GTATCGCAAT CCGGCGCACG AGCAGCGCGT CAAGCAGATC
CTGCAGGAAG AACTGCCGGG CGCCTTCGTC TCCGCTTCGC ACGAGCTTTC TCAGGAATAC
CGCGAGTTCG AGCGCGTCTC CACGGTCGTG GCCAACGCCT ACGTCGGGCC CCGTGTCTCC
GAATATCTCG GCCAGCTCGA GACGCACCTT TCCGACAAGG GCTTCGGCGG CGACTTCTAC
GTCGTGCAGT CGACCGGTGG CCTGTTTCCG ATCGAGCATG CACGCGTCGG CTGCGTCCGG
ATGCTGGAGT CCGGCCCCGC AGCCGGCGTG ATCGGCGCGC AGGCGATCTG TGCACAACTC
GGCATGGGCG ATGCGATTGC CTTCGACATG GGCGGCACGA CGGCCAAGGC GGGCGTGATC
AGCCAGGGGC GGCCGCTCAC GACGGGCTCG GCGCTGATCG GCGGCTACGA GCGCGCGCTG
CCGATCCAGA TTCCGATGAT GGACATCCAC GAGGTCGGCA CCGGCGGCGG TTCGATCGCC
CGCGTGGAGA CCGGCAACGC GCTGCGTGTG GGGCCGCAGA GCGCGGGCTC CATTCCCGGG
CCGGTGGCCT ATGGACGCGG CGGCAAGGAG CCGACCGTGA CCGACGCCAA CCTGGTGCTG
GGCCGGCTCG ACGCCGACAA CTTCCTGGGC GGCGAACTCA AGCTCGACCT GGAAGGCTGC
AAGCGCCAGA TGGCCGAGCG CGTGGCCGGC CCGCTGGGCC TGGACCCGAC CGAGGCGGCC
GACGGCATCC TGCGCATCGC GGTGACGCAG ATGTCGCACG CCGTGAAGGC CGTGACCACC
GAGCGCGGCC TGGACGCCGG CAGCTTCACC ATGGTGGTGT ACGGCGGCGC CGGCCCGCTG
CATGCCTCGG CGATTGCACG CGAGATCGGC ATCCGCAAGG TGCTGATTCC GTACGCGCCG
GGCTACTTCT CGGCCTACGG GATGCTGTTC TCCGACTTGC GCTACGACTA CGTGCGCTCG
GTGTTCCGCA AGCTCAACGA CGTCTCCTTC GAGGAGATCG AATCCGCCTA CAAGACGATG
GAAGACGAGG GCCGCGCCGC GCTGGCGCAG TCCGGCGTGA AGGCGGACGG CGTCGTGATC
GAGCGCGCGG CCGATATGCG CTACGTGGGC CAGGAGCACG CGGTGACGGT CGACCTTCCG
CTGGCGTTCT TCGAAGGCAA GGACCGTTCG GCGATCAAGC AGCAGTTCGA TGAACTGCAC
AAGGTGCGCT ATGGCACGTC GGCGCCGAAG GAGCCGGCGG ACCTGGTGAG CCTGCGCGTC
ACTGTGCTCG GCATCATGAA GAAGCCGCCC AAGCACAGCG TCGACGAGGG GTCGTCCAAG
CCCGAGAAGG CCGCAATGCG TGCGGTCAAA CCGGTGTACT TCCGCTCTGG CGGCTGGGCC
GACACGCCCA TCTACAAGCG CGACCGGCTG CGCGCGGGCA ACGTCATCAG CGGCCCCGCG
CTGATCGAGG AGCACGCCTC CACCACCGTG ATGCAGCCAG GCGACGAGAT GCGCGTGGAC
GAACTCGGCA ACCTTCAAAT TTCCATCGGG AGCGATCGAT CATGA
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| Protein sequence | MATPSTPNLR IAVDIGGTFT DMAAFDEATG KLLFGKALST HGQLVNGIQA TLDSADIDVR
NGQLFLHGST IAINTLLERT GANTALLITE GFRDIYEIGR VNRPDAYNLF FNKHQPLVKR
SLRFEVTERL RADGSLHKPL DEGAVRELAR ELKSQNIEAV AVLLLHSYRN PAHEQRVKQI
LQEELPGAFV SASHELSQEY REFERVSTVV ANAYVGPRVS EYLGQLETHL SDKGFGGDFY
VVQSTGGLFP IEHARVGCVR MLESGPAAGV IGAQAICAQL GMGDAIAFDM GGTTAKAGVI
SQGRPLTTGS ALIGGYERAL PIQIPMMDIH EVGTGGGSIA RVETGNALRV GPQSAGSIPG
PVAYGRGGKE PTVTDANLVL GRLDADNFLG GELKLDLEGC KRQMAERVAG PLGLDPTEAA
DGILRIAVTQ MSHAVKAVTT ERGLDAGSFT MVVYGGAGPL HASAIAREIG IRKVLIPYAP
GYFSAYGMLF SDLRYDYVRS VFRKLNDVSF EEIESAYKTM EDEGRAALAQ SGVKADGVVI
ERAADMRYVG QEHAVTVDLP LAFFEGKDRS AIKQQFDELH KVRYGTSAPK EPADLVSLRV
TVLGIMKKPP KHSVDEGSSK PEKAAMRAVK PVYFRSGGWA DTPIYKRDRL RAGNVISGPA
LIEEHASTTV MQPGDEMRVD ELGNLQISIG SDRS
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