Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5963 |
Symbol | |
ID | 7975002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 688837 |
End bp | 689955 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644796526 |
Product | cobalamin synthesis protein P47K |
Protein accession | YP_002947800 |
Protein GI | 239820615 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.103061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCC ACTTCTCCTC GCTGCTGGCA GCCGACCAGC CCGGGCAGGT GCGCGTGCCC GTGACGGTGC TGACCGGATT CCTCGGCAGC GGAAAGACGA CGCTCCTCAA CGAGCTGCTG CGCGAACCTG ATCTGCACGG CACCGCAGTC ATCGTCAACG AGTTCGGTGA AATCGGCATC GACCACGACC TGATCGCACA CACGACGGAA GACACCATCC TGCTGGCCAA CGGCTGCATG TGCTGTGCGG TGCGCGGCGA TCTCATCGGC GCGCTGGTGG GACTCGTCGA GAGAGCCGTC TCCGATGGCT CGGCGCTGTG CCAGGTATTG ATCGAAACCA GCGGCCTGGC CGACCCGGCC CCGATCCTCC GGACCTTGAT GGGAGAGCCT GCCGTCAAGG ATCGCTTCAG GCTGGCGGGC GTGTGCTGCA CGGTCGACGC AGTGCTGGCG TTTCGCACGC TGGATCGGCA TCCGGAGGCC GCGCGGCAGA TCGCCATGGC CGACCACCTC TTCCTCACAA AGACCGACCT CCTGGGCGAA CCGGCATCGC AGGCGTTGCT CGACTGCGTG AGGAGCCTGA ATCCCACGGG CACGGTGCAC CAGCAGCGCG AAGTGCACGT GGCCGTGTTG CGGCAGACGA TGGAGACGCG CGCGGACGAC GCGCGGCCGG TCCCCGCAGA GCGCGGGCTG TTCTACAGGC CGATGCCGGT CACCGGCGGC CCAGGCGCCT CAGGCGAGCC ATCTCCCCAT TCGGGCGGGA TCACCTCATT CGTCCTAGTT CGCGACGATC CGTTGCCGCG AGACGGCTTC TATGCCTGGC TCGACATGGT GATCGCGATG CGGGGTGAAG ACCTGCTGCG TGTGAAAGGA ATCGTCAATC TGCAGGAGCA GCCGGAGCAG CCGCTTGTCT TTCACGGCGT ACAGCATCTG TACCAGCCAC CGGTGTCATT GTCGGCTTGG CCGAGCCCGG ACCGACGCAC CCGGATTGTC TTCATCACCC GAGGCGTCGA CGCGGAAGCG ATGGACGAGT CTCTGCGCGT TTTCGAACGA CGTGGGCGGC AGAGGCGCCC TGCCGCGTCT TCACCGGACC CCTCATCACA ACTCAAGGAG ACTCCATGA
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Protein sequence | MSGHFSSLLA ADQPGQVRVP VTVLTGFLGS GKTTLLNELL REPDLHGTAV IVNEFGEIGI DHDLIAHTTE DTILLANGCM CCAVRGDLIG ALVGLVERAV SDGSALCQVL IETSGLADPA PILRTLMGEP AVKDRFRLAG VCCTVDAVLA FRTLDRHPEA ARQIAMADHL FLTKTDLLGE PASQALLDCV RSLNPTGTVH QQREVHVAVL RQTMETRADD ARPVPAERGL FYRPMPVTGG PGASGEPSPH SGGITSFVLV RDDPLPRDGF YAWLDMVIAM RGEDLLRVKG IVNLQEQPEQ PLVFHGVQHL YQPPVSLSAW PSPDRRTRIV FITRGVDAEA MDESLRVFER RGRQRRPAAS SPDPSSQLKE TP
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