| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5954 |
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| Symbol | |
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| ID | 7974993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 672283 |
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| End bp | 672846 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796518 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002947792 |
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| Protein GI | 239820607 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCGG CGCGCATCGG CGCGCAGGTG AAGGCGCTGC GCATGGCGGC TGATGTATCC
GGTGGAGCGC TGGCGAAGAC CTCGGGGATT TCGGCCTCGA TGCTCTCGCG CATCGAGCGC
GGTCTGGTCT CGCCGTCGGT GGAGACCCTG GAGCGTCTCG CGAATGGTCT AGGGGTGCCG
GCGTCGCGCT TCTTCGGGGA CCAGGCGCGG CGCACGGACT TCTGCCATGT GCGCGCGAGG
CAGGGCGTTG TCGTCGATCG GATCGGTGCG GTCTCCGACT ACCGCTACGA GCTGCTGGGC
CACCTGCTGT CGGGCAACCT GTTCGTCGAG CCCTATCTGG TCACGCTGTT GCCCGGTGCC
GATCCCTACG TGACCTTCCA GCACCCGGGC CTCAAGTTCC TGTACTTCCT GTCCGGGGAG
GTCAGCTACC GCTATGGCGG CAGGACTGTG GAGGTGAGGG AGGGGGACGC GCTGCTGTTC
GATGCAACCG CGCTGCACGG GATCGAAGCC ATTCAGAACG GGCCGGTGTC GTACCTGTCG
GTGGTTTTCA CGCTGCGCGA GTGA
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| Protein sequence | MSAARIGAQV KALRMAADVS GGALAKTSGI SASMLSRIER GLVSPSVETL ERLANGLGVP
ASRFFGDQAR RTDFCHVRAR QGVVVDRIGA VSDYRYELLG HLLSGNLFVE PYLVTLLPGA
DPYVTFQHPG LKFLYFLSGE VSYRYGGRTV EVREGDALLF DATALHGIEA IQNGPVSYLS
VVFTLRE
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