Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5904 |
Symbol | |
ID | 7974943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 613189 |
End bp | 614037 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644796477 |
Product | metallophosphoesterase |
Protein accession | YP_002947751 |
Protein GI | 239820566 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.452182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGCTAT TGATCCTCTC CGACCTGCAT CTCGAGTTCG CACCTTTCAA GCCGGTGCCT GATCTCGAGT TCGACCTCGT CATCCTCGCC GGCGACATCC ATTCGCCGGC CAAGCGGGCC ATCGAGTGGG CGATGACGCG CCTTCCCGGC AAACGCGTGA TCTACGTGCC CGGCAATCAC GAGTACTACG GCGGCCGGCT GGGCACGACG CTGGCCGCTG CGCGCACCAC CTCCGAAGGC AGCCATGTGC ACCTGCTCGA CGGCGACGAG CTCGTGATCG ATGGCGTGCG CTTCCTCGGC GCGACGCTCT GGACCGATTT CGCGCTCGCG ATTGAGGCAC CCGAAGGGCG GGTCAGCGAC GTCCCATGGG CGATGAAGCA GGCGACCAGC GTGCTGAACG ACTACGCGCT GATCCGCACG GTCGACGACA CGTCCGAGCC CAACACCTGG GGGGACATAC TGGGCAGGCC GCTCCAGGCG GCCGACACGC TGCAGATCCA CCAGGCCCAG CGGGCATGGC TGCAGGCGAA GCTCGCTGAA CCGTTCGACG GTCGAACAGT GGTGGTGACG CACCATGCGC CGCACCGCGG TTCGCTCTCG GCGCAGTATG CCGACGACTG GGTGTCGGGC GCGTTCGTGA GCGAGCTGCC CCACGACTTC TTCGAGGTGC CTGTGCTCTG GGTGCATGGC CACACCCACC AGAGCTTCGA CTACCGAGTC CGTGGCTGCC GGGTGGTGTG CAACCCGCGG GGGTACGTAC GCCGCATGAG CGGTCGGATC GAGAACCAAG CGTTCGATCC GGCCCTGATC ATCGACGTGC CACCGCCCGA GGACGACTGG CGACCATGA
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Protein sequence | MKLLILSDLH LEFAPFKPVP DLEFDLVILA GDIHSPAKRA IEWAMTRLPG KRVIYVPGNH EYYGGRLGTT LAAARTTSEG SHVHLLDGDE LVIDGVRFLG ATLWTDFALA IEAPEGRVSD VPWAMKQATS VLNDYALIRT VDDTSEPNTW GDILGRPLQA ADTLQIHQAQ RAWLQAKLAE PFDGRTVVVT HHAPHRGSLS AQYADDWVSG AFVSELPHDF FEVPVLWVHG HTHQSFDYRV RGCRVVCNPR GYVRRMSGRI ENQAFDPALI IDVPPPEDDW RP
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