| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5891 |
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| Symbol | |
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| ID | 7975942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 603561 |
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| End bp | 604544 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796467 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947741 |
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| Protein GI | 239820556 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.580231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGC ATCGGCGCTC CACACTGCGA CTGGTCGCCG CGATGGCGGC AGGCGCCTTG
CCCTTCGCTC GCGCGCAAGC GCAGCCTTTC CCCTCCAAGC TCATTCGTAT CGTGGTGCCG
CTGGCGCCCG GCGGTTCAGC CGACTCCATG GCCCGGCTGC TCGCCGCAGG CATCGCCCGG
GTATTGGGGC AATCCGTGAT CGTGGACAAC AAACCGGGCG CGGGTGGGCT CAATGGCATG
GCCGAAGTGG CCCGAGCTCC GCGCGATGGC TACACGCTCG GCTATTCGCT GGCGGGGGCG
CTCACGGTGG CCAACCATAT CGCGCTGAAG ATGCCCTACG ACCCGGCGAA GGACTTCGCA
CCCATCACGC AGGTGGTAGC AGTGCCAGAG ATCATCGTCG TCAACCCGAA GCTCGGCGTG
ACCAGCCTGC AGCAGCTCGT CGCGCTGGCC AAGGCCAAGC CCGGTACGCT GAATTTCGGT
TCCGCAGGTA ACGCGACCAT TCCTCACCTG GGCGGCGAGC TGTTCAAGCA TGAAACAGGC
ATCGACATCG TGCACGTGCC CTACCGAGGC ACCGGCCCGG CGCTGAACGA TCTGTTGGCG
GGGCAGGTGC AGATGATGTT GGCCGACGTC ACCCTGGTGC GCGCGCACAT TGAGGCGGGG
CGGCTTCTGC CGTTGGCCGT GGCCGGACCG CGGCGCATTG CCGTGCTGCC GGCAGTGCCC
ACCACGGCTG AGGTTGGCTT GCCCGGCGTG CAGGTGTCGA ACTGGCACAC GCTGGTGGCG
CCCGCAGGCA CGCCCGCGGA GGTGGTGGCC CGCCTGCGCG ATGCAGTGCA GCGAGCCATG
GCATTGCCTG AAGTGCAAAG CCGGCTGACC CAGGAAGGAG CCGAAGCGGT AGTCGGAACG
CCAGCGCAGA CGCTCGCGTT CCTGGACAAG GAGCGCGCAC GCTGGGGTAC GCTGGTCAAA
AAACTCGGCA TCCGCTGGGA TTGA
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| Protein sequence | MNPHRRSTLR LVAAMAAGAL PFARAQAQPF PSKLIRIVVP LAPGGSADSM ARLLAAGIAR
VLGQSVIVDN KPGAGGLNGM AEVARAPRDG YTLGYSLAGA LTVANHIALK MPYDPAKDFA
PITQVVAVPE IIVVNPKLGV TSLQQLVALA KAKPGTLNFG SAGNATIPHL GGELFKHETG
IDIVHVPYRG TGPALNDLLA GQVQMMLADV TLVRAHIEAG RLLPLAVAGP RRIAVLPAVP
TTAEVGLPGV QVSNWHTLVA PAGTPAEVVA RLRDAVQRAM ALPEVQSRLT QEGAEAVVGT
PAQTLAFLDK ERARWGTLVK KLGIRWD
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