| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5884 |
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| Symbol | |
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| ID | 7975935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 594620 |
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| End bp | 595858 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796460 |
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| Product | beta-lactamase |
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| Protein accession | YP_002947734 |
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| Protein GI | 239820549 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTC GACCTTCGAC CGCCACCGCC CGCACCGGGC TGTCCGTGCT TCTGAGTTGT
GTGTTGCTGG CGGGTTGCGC GACAGCGCCA CAGGCCACGG CCGACCTGCC GTTCGTCGAG
GGCACGCCTT CGGCGACGCT CCTGGCCGTT CGCCGCGCCA AGTCGGACCC GGCGGTGAAT
TATCTGACCT ATCAGCACAT GGACCAGCTG TTCGGGGTCT CGCGCTTGAC TGCGTCACCT
CGGCCGACAC CGATCGCCGG CCGCGCGCAA TGGTCCAGTG GCGACTTCCG TCTATCCACC
GGCGGCACGA CTGAAAGCTT CGACACCTTT CTCGAGCGGC ACCGCATGAA CGCGATCGTG
GTGCTGCAAG ATGGGAAGAT CGTCAAGGAG ACCTACCGCA ACGGCAGCGG GCCGGCGACG
CCCTTCATCG GCTACTCGAT GTCCAAGTCA GTCATCGCCA TGTTGATCGG TATCGCCATC
CAGGAAGGAC GCATCAAGAG CGTCAACGAC CCCATCGTCC AGTACCTGCC GGAACTCAAG
GGCACGGGCT ACGACCCGGT CACCGTGCGC AACCTGCTGA TGATGCGCGC TGGCACCGAC
TGGAAGGAAA TCTACACACC CGGCAGCGAG CTCGACCGGC ACCGCGACCA ATCGCTCAAC
GAGGCCAAGG TGTACTACGA GGACTATGCA TTCAAGGCCA AGTCGCTGCT CCCGCCAGGC
ACGCGCTTCA ACTATTCGAC GCTCGATACC AACCTCGCAG GCTGGCTGCT TGAACGTGCC
GTTGGCATGC CGTTGTCGAC TTACATGGCG ACGCGGCTCT GGCATCCGAT GGGGGCCGAG
GCCGACGCCT ATTGGGTGAA CCAGGGGCCG GGTCAGGCGC AGCGTCCGTT CTACGGTGCC
GGAATGGCGG CCAGCCTGCG CGACTGGGCT CGCATCGGGC AGGTTGCGCT GGACGATGGT
CGGGCACAAG GAGCCCAACT GGTCCCGGCC GCCTGGATGA AGGAATCCAC CTCGCGCCTG
AACGATCAGC CCGGCTATGG CTACTTCTGG TGGACCATCG GCGACAAGGG TTACGGCGCC
CTCGGCGTCA ACGGCCAGGC GATCTACGTG CAGCCTGCCA CGCGCGTGGT GATCGCGGTC
GCTGGCTATT GGAAGGGCGC CACGGACGAC ACGCTCAGTG ACGAACGCAC TGCCTTCTTC
GAGGCCGTCG CGGCCTCCGT GGCCAAAGGA GGCCGCTGA
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| Protein sequence | MTIRPSTATA RTGLSVLLSC VLLAGCATAP QATADLPFVE GTPSATLLAV RRAKSDPAVN
YLTYQHMDQL FGVSRLTASP RPTPIAGRAQ WSSGDFRLST GGTTESFDTF LERHRMNAIV
VLQDGKIVKE TYRNGSGPAT PFIGYSMSKS VIAMLIGIAI QEGRIKSVND PIVQYLPELK
GTGYDPVTVR NLLMMRAGTD WKEIYTPGSE LDRHRDQSLN EAKVYYEDYA FKAKSLLPPG
TRFNYSTLDT NLAGWLLERA VGMPLSTYMA TRLWHPMGAE ADAYWVNQGP GQAQRPFYGA
GMAASLRDWA RIGQVALDDG RAQGAQLVPA AWMKESTSRL NDQPGYGYFW WTIGDKGYGA
LGVNGQAIYV QPATRVVIAV AGYWKGATDD TLSDERTAFF EAVAASVAKG GR
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