| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5882 |
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| Symbol | |
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| ID | 7975933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 592661 |
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| End bp | 593638 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796458 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947732 |
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| Protein GI | 239820547 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAG CAAAAGCCAC AGACATACGA CTCGCCCTGG CCAGCGACCT GACGATCTGG
CGCTCGTTCC TGGCGATCGC GGAGCTGGGC AGCCTGACCC GCGCCGCGCT CTATCTGGAC
AGCAACCAGT CGCTGCTGAG TCGGCAGATC AACGCGCTGG AACGCCAGTG CGGCTGCCGC
CTCTTCACGC GCACAGGGCG TGGCGTGGAG CTGTCGGAAA CCGGCACCCG CATCCTGGAA
CAGGTGCGAG AGTTGCTGCA GGGCGCGCAG CAGCTCGAGA CCGATATTCG CAGCAACCTG
CAGCAGCCAG CCGGGCGTGT CACCCTGGGA CTGCTGCCCT CCATCTCGTC GGCGCTGGTC
GGGCAGTTGT TCTCGCACAT GCGTGAGCAC CACCCGGCGG TGCAGCTGAA GATCCTGGAA
GGCTCCAGTG GCCAGGTCGA AGAATGGCTG ACGGATGCGC GCGTGGACTT GGCCATCCTG
TACCGGTACG CTACGCTGCC CGAGCACGAG CAGAAGCTGG CGACGGTGGA CAGCTACCTC
GTCGGCCCAG CGGGCGATGC ACTCACGGGC GGCGGTGACA TCCCGGTGTC GGCCCTGGCC
GGTTTGCCCT ACATCCTGCC CAGTGCGCCC AACGGCCTGC GCAACGCGCT CGATGCCGTA
GCACGCCAGG ACAAGCTGGC CGTCGTGCCG GTGATCGAGG CTGATTCGCT GCCGCTGTTC
AAGTCCCTGG CTGAGCAGGA GCACCTGTAC TCGGTGCTCC CGCTGCATGC GGTGTGGCAC
GAGATCGAGG AAGGCCGGCT GCAGGCCGCC AAGATCGCCG ATGCGCGCCT GCAACGCAGC
ATCACCATGG CCATGTCCAA GAGCAAGGGG CCGGCACGCG CGGTGCAGGT GGTGGCCGCG
GCTATCTGCA CCATCGTCGA CGAGTTGGGG CGCCGCGGCA TGTGGCATTC CACGGCGCAG
GACATCTCCA TGGCCTGA
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| Protein sequence | MQTAKATDIR LALASDLTIW RSFLAIAELG SLTRAALYLD SNQSLLSRQI NALERQCGCR
LFTRTGRGVE LSETGTRILE QVRELLQGAQ QLETDIRSNL QQPAGRVTLG LLPSISSALV
GQLFSHMREH HPAVQLKILE GSSGQVEEWL TDARVDLAIL YRYATLPEHE QKLATVDSYL
VGPAGDALTG GGDIPVSALA GLPYILPSAP NGLRNALDAV ARQDKLAVVP VIEADSLPLF
KSLAEQEHLY SVLPLHAVWH EIEEGRLQAA KIADARLQRS ITMAMSKSKG PARAVQVVAA
AICTIVDELG RRGMWHSTAQ DISMA
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