Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5824 |
Symbol | |
ID | 7975875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 530787 |
End bp | 531995 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644796405 |
Product | hypothetical protein |
Protein accession | YP_002947679 |
Protein GI | 239820494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.41273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAG ACAGTTCTTC CGGAAGCCAA GCGCCGAACG GGATCGAGAG CACCGAACCT TGGTATGGCG TGGGCTCCAT CCAGGGAGAT GCGCCTGCTG CGGGCCGCGG TCATACCCGT GTGCCCGATG CCATCGAGCG CCGCTACCTG CGCATCGACA ATCGTTACTT CTTCCCGGAC CGCACCCTCG CGTTCATCGA CGACGGCGGC CGTCTCCGCG TGCGAACCGA GAACCGCGAG GTGCTGCACA GCGTCGTGGC GATCGCCGAA ACGCGCGGCT GGCGGGTCAT CGAACTCACA GGCACCGAGA CCTTCCGCCA GGGCATGTGG CACGAAGCCG CGCTGCGAGG CATCGAGGCC CGAGGCTACG AACCGACTCC GACTGAAATC CTCCACGTCC AGCGTGCGTT GAAGAAACGA GGCCCGCCGT CGCACGAGAA TGGACGGCGT CCGATACCTG CGTCGCTGGA CCGCGAAGCA ACAACCGTGC ACCACAGCGC CGTACCCGCC GAAGCCGATC CCAGTGCCAG TCTTCGTCCG CACAAGGACG AACCGCAAGA CCGCCGATTC GAACGGGGAG GACCAAGATC GCCAGTCAGG GGGATGTTCG TGGCGGCCGC TGCCGCACCC TATCAATTCG ATCCAACGCA GCGCATGTCC TTCTACGTGA CCGTTCGCGT GGAGACCGGG GCTCGCACCA TTTGGGGTAC GGACCTCGAG AGGGCCCTCG CAGAGTCGAC CTCGCAACCG CGCATCGGCG ACCAAGTGGT GCTCACGCAG CACGGCACCC GTCCGGTCAA CGTCCGGGTG GCGACCCGCA ATGCGGAAGG CGAGCTGGTC GGCGAAAAGA AAATTGTCGC GCAGCGTGCG CACTGGAGCA TCGAGACATC CGATCACCTT CGCGCGATGG AACACCACGC CATGCGCATA CGCACCGGGA AATTGCTGTC CGATGCGGCC CAGGGTCCGC ACCCCGAACT GGCCACGGCG GCAGCGGATC TCAAGTTGGC CGAGCAGTAC GCACAGCGTG TGACCAGCGA TCCGTCCTCC CAGCAGCACC TCGTACAGCT GATTCGCGAT CGGATCGCCG AGGCGCTGGC GCAAGGCCGC GCCATCCACC TTCCGGATCG ACTCCCGCGC GTCGCTCGCA TGCATGCGCG CCAACGCACG GCCAGAAGCC AGGAGGATTT GAGCCGCGAG CGCGTCTAG
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Protein sequence | MSTDSSSGSQ APNGIESTEP WYGVGSIQGD APAAGRGHTR VPDAIERRYL RIDNRYFFPD RTLAFIDDGG RLRVRTENRE VLHSVVAIAE TRGWRVIELT GTETFRQGMW HEAALRGIEA RGYEPTPTEI LHVQRALKKR GPPSHENGRR PIPASLDREA TTVHHSAVPA EADPSASLRP HKDEPQDRRF ERGGPRSPVR GMFVAAAAAP YQFDPTQRMS FYVTVRVETG ARTIWGTDLE RALAESTSQP RIGDQVVLTQ HGTRPVNVRV ATRNAEGELV GEKKIVAQRA HWSIETSDHL RAMEHHAMRI RTGKLLSDAA QGPHPELATA AADLKLAEQY AQRVTSDPSS QQHLVQLIRD RIAEALAQGR AIHLPDRLPR VARMHARQRT ARSQEDLSRE RV
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