| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5787 |
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| Symbol | |
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| ID | 7974908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 489212 |
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| End bp | 490138 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796368 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947642 |
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| Protein GI | 239820457 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGAT TGCGTGCGTA CGAGGTGTTT GTCACCGTGG TGGCGCGGGG CAGCTTCACG
AAGGCGGCCG ACGCGCTGGA CACCTCGCCG GCCAACGTGA CGCGCTACGT CAATGAGCTT
GAAGCCCACC TGCGCACGCG GCTCATGAAC CGCACATCGC GCCGCCTGTC GCTCACCGAA
GGGGGCGAAG CGCTCTTCGA CCGGGCGAAA TCGATCCTCG AAGAGGTGGC GGAGACCGAG
GCCCTGGCGA CCACCGCGTC ATTGCAGCCG CGCGGGCGCC TGCGCATCAA CGCGCCGCTG
AGCTTCGGCA GCCTCGTGCT GGCGCCGCTG TGGCCGAAGT TCATGGCGAA GTACCCCGAC
GTCGAGCTCG ACATCGCGCT CATCGACCGC GTGGTCGACA TCGTCGAAGA GGGCTACGAC
CTGGCCATCC GCATCTCGCG CACCACCTCG GGCAACCATA TCGCGCGCCG CCTGGGCCGC
TCGCAGAACC TGGTCTGTGC CTCGCCCGGC TACCTTGCGG CCCATGGCAT GCCCGAGACG
CCGGCGGACC TTTCGCGGCA TCCGTGCCTG GGCTACACCT ACGGTGCGAC TTCGGACGAA
TGGCAGTTTG CCGGCCCCGG CGGAACACTG GAATCCGTGC GCGTGCGCTG GGCCTTGCGC
GCCAACAATG GCGAAACCGC GCGCGCCGCG GCGCTCGCTG GTGCCGGCGT CATCTGGCAG
CCGAGCTTCG TGATTGGCGA GGATGTGCGG GCTGGTCGAT TGGTCGAGGT CATGCCTGGT
TATCACATGC CGCCCGTCGA CATCCTGGCA ATCTATGCAA GCCGTCGACA TCTCAGTGCC
AAGGTGCGGA TGATGGTCGA CTTCCTGGTC GATGCTTTTC AAGACTCGCC GCTGGTGACA
GGCGGGATGA CGGCGGTGGG CAAGTGA
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| Protein sequence | MDRLRAYEVF VTVVARGSFT KAADALDTSP ANVTRYVNEL EAHLRTRLMN RTSRRLSLTE
GGEALFDRAK SILEEVAETE ALATTASLQP RGRLRINAPL SFGSLVLAPL WPKFMAKYPD
VELDIALIDR VVDIVEEGYD LAIRISRTTS GNHIARRLGR SQNLVCASPG YLAAHGMPET
PADLSRHPCL GYTYGATSDE WQFAGPGGTL ESVRVRWALR ANNGETARAA ALAGAGVIWQ
PSFVIGEDVR AGRLVEVMPG YHMPPVDILA IYASRRHLSA KVRMMVDFLV DAFQDSPLVT
GGMTAVGK
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