| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5767 |
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| Symbol | |
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| ID | 7974888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 472839 |
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| End bp | 473273 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796348 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_002947622 |
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| Protein GI | 239820437 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.576026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTGC ACCTTGCGAG CGCGCCGCAG GAAGGCGACG GCCGGCCGCG CAGCGGACCG
CAGCGCCACG TGCCCTTTTC CGAGCACCTC GGGCTCAGGC TCGAGCATGC GGAGGGCGGC
GAATCGCTGG TGTCGGTGGT GCTGCGCCCC GAACTGCTGA ACAACCACGC GAGCGGCCAC
GGCGGCGTGC TGATGACCCT GCTCGACAGC GCGATGGCGC ATGCCGCGCT CTCGCGCGTG
GGCTATGCAC GCGAGGTCGT CACGGTCGAC ATGCACATCG CCTTCATGCG GCCCGCGGGC
GGGCTGCTGC AGGCGCAGGG GCGCGCCACG GGCGGCGGGC GTTCGGTGTG CTTTTGCGAG
GCCACCGTCA CCGATGCCAG CGGCGAGGTG GCGGCGCGTG CGATGGGTAC CTTCCGCTAC
CGCGACCCGG CTTGA
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| Protein sequence | MSLHLASAPQ EGDGRPRSGP QRHVPFSEHL GLRLEHAEGG ESLVSVVLRP ELLNNHASGH
GGVLMTLLDS AMAHAALSRV GYAREVVTVD MHIAFMRPAG GLLQAQGRAT GGGRSVCFCE
ATVTDASGEV AARAMGTFRY RDPA
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