Gene Vapar_5736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5736 
Symbol 
ID7975102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand- 
Start bp444400 
End bp444879 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID644796317 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_002947591 
Protein GI239820406 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCA AGAACACGAT TTGTCTCTGG TACGACGGCA CCGCCCTGGA TGCCGCCAAG 
TTCTACGCAG AGACTTTCCC CGACAGCGCC GTGGGCGCCG TCCATCGCGC GCCCGGCGAC 
TATCCCTCGG GCAAGGAGGG CGACGTGCTG ACGGTCGAGT TCACGGTGAT GGGCATCCCC 
TGCCTGGGCC TGAACGGAGG CCCGGCGTTC AAGCACAGCG AGGCCTTTTC GTTCCAGGTC 
GCGACCGACG ACCAGGCCGA AACGGACCGC TTGTGGAATG CGATCATCGG CAACGGCGGC 
CAGGCCAGCG CATGCGGCTG GTGCAAGGAC AAGTGGGGAT TGTCGTGGCA GATCACGCCG 
CGCGCCCTGA CGGCCGCCAT CACCGATCCC GACCCGGCGG CAGCCAAGCG AGCGTTCGAA 
GCCATGATGG AGATGACAAA GATCGACATC GCCGCGATCG AAGCGGCTCG GCGCGGCTGA
 
Protein sequence
MISKNTICLW YDGTALDAAK FYAETFPDSA VGAVHRAPGD YPSGKEGDVL TVEFTVMGIP 
CLGLNGGPAF KHSEAFSFQV ATDDQAETDR LWNAIIGNGG QASACGWCKD KWGLSWQITP 
RALTAAITDP DPAAAKRAFE AMMEMTKIDI AAIEAARRG