Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5709 |
Symbol | |
ID | 7975762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 423713 |
End bp | 424696 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644796290 |
Product | hypothetical protein |
Protein accession | YP_002947564 |
Protein GI | 239820379 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.21123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTTCA TCCAACGCGC CGCGGGCCTT TTGCTCGCCG CACTTGCATT GGCCCCGGCC GCGGCCCTCG CACAAGCCGA ATGGCCCGCC GCCAAGACCA TCACCTACGT CGTGCCCTTC ACGGCCGGCG GCTCCACCGA CATCGTGGGC CGCATCCTGT CGAACAAGCT GCAGGAGAGC CTTCACCAGT CGGTGGTGGT GGACAACAAG CCGGGGCAGG CCGGCGGCAT CGGAGCGGCC TACGTGGCCA AGGCCGCGCC CGACGGCTAC ACGCTGTTCG GCGGCACCAT CAGCACGCAC GCCATCAACG CCAGCCTCTA CAAGAAGCTG CCCTACGATC CGATGAAGGA CTTCGAGCCC GTGTCGCTGG TCGGGCGGCT GCCCAACGTG CTGATCGTCA ACAGCCAGCT CGGCGTGAAC TCGGTGGCCG AACTCATCGC GCTGCTCAAG AAGGACGAGT CCAAGCGCAC CTTCGCATCG TCCGGCGCCG GCACCTCGAC GCACCTGGCG GGCGAGATGT TCGCCGACAT GATCGGCGTG AAGCTCACGC ACGTGCCGTA CAAGGGCACG CCGCCGGCCA TGACCGACGT CGCGTCGGGC CTGGTGCCCT TCATGTTCGA CCAGGTGACG GCCGCGCTGC CGCTCGTCAA GAGCGGCCGG CTCAAGCTGC TGGCCGTGAC CACCGGCAAG CGCATCGCGC TGGTGCCCGA ACTGCCCACC ATGATCGAGT CGGGCGTGCC GGGCTTCGAG ATGTCGTCGT GGCAGGCGGT CTATGCGCCC AAGGGCACGC CCAAGCCCAT CGTGCAGCGT TTGAATGCCG AGATCGTCAA GGCGCTGAAG CAGCCCGACG TGCAGGCCAA GCTCTCGGGC CAGCTGGCGA TGGAGATCGT CGGCAGCACG CCCGAGGAAC TGCGCGACCA CATGGCGCGT GAGATCCCGC GCTGGGCCGA GCTGGTGAAG AAGTCGGGCG CGACCGCGGA CTGA
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Protein sequence | MPFIQRAAGL LLAALALAPA AALAQAEWPA AKTITYVVPF TAGGSTDIVG RILSNKLQES LHQSVVVDNK PGQAGGIGAA YVAKAAPDGY TLFGGTISTH AINASLYKKL PYDPMKDFEP VSLVGRLPNV LIVNSQLGVN SVAELIALLK KDESKRTFAS SGAGTSTHLA GEMFADMIGV KLTHVPYKGT PPAMTDVASG LVPFMFDQVT AALPLVKSGR LKLLAVTTGK RIALVPELPT MIESGVPGFE MSSWQAVYAP KGTPKPIVQR LNAEIVKALK QPDVQAKLSG QLAMEIVGST PEELRDHMAR EIPRWAELVK KSGATAD
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