| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5708 |
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| Symbol | |
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| ID | 7975761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 422131 |
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| End bp | 423609 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796289 |
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| Product | peptidase domain protein |
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| Protein accession | YP_002947563 |
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| Protein GI | 239820378 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.93705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTGG GCTGCCTGTC GGGATTTGCC GCTGCTTCTC TGGCGCAGGC CGCGCCGCTC
GGCGATCCCT TCATGGTGAA TACCGCCACC GCGGGCAACC AGCGTCCGGT CTACTTCTCC
GCAGGATCGA ACGGCGAGAA ACTTCTGATC TGGTCCGACG CCGCGGCAAA TGCCACATAC
GCTCAAAGAA TCAGGTCGTC AGGAACGCCT TATCTGACCA AACACCTGAT CCAGGCGCCT
CCGGCGTATG CGAATTTCTC GGTCGACCGC ATCGGCAACT TCGTCTTCGG AAGCGAGCCG
GGAAGAGTCA CGGCCTATGA CAGAAGCGGC ACTCTGCTCT CCAGTTTCCA AACCACTCCG
GATTCATCGA GCACGGTCGC CAGCATGGAC ACGGATGGCA ACATCACTGC CGCCTACTCG
CGCTCGGCCT CGGAAGGGGC GCCTCGTACG ATTGCAATCA GGCGATTCAA TACCCGCGGA
GTTCCCATCG GTCCCGAAGT CATCGTTGCA TCGGATGCCC CGGACAAACT CTCCGGCCCC
AGTTCGATTG CCACCGACGA TGCAGGAAAC ATCGCATTGT CATTTGCGAC CAGGCCCGGT
CCCACGGCAA ACCAATCCAA CATCATGATC CAGCGCTTCA GCCGCGCAGG TGTTGCGCTG
ACTCCGGCGC TTGTCGTCGG CGCCATCCGA TCGATCTACA GTTCGGGCGG CCGCATTGCC
ATGGACCCCG GCGGAAGATC CGTCATCAGC TGGAGTGCTT CCCAGGATGA CAACTACACC
TGGAACATCT ATGCCCGCCC CTATGACGCG AATGGCAACC CCAGCAGCGG ATTGGTGCGA
GTCAACCAAC GCATCCACGA AGGCCAACCC TGGCCGAATC CGGGGGTTGC AGAGAACGGC
GATTTTGTCG TTTCGTGGAT TGCATCGAGC GGCGTGGTCG GTGGCCCCCA GACCTCTACA
TTGGCGGCCA GGCAATTTCG CAGCGACGGA ACTCCAATTG CCGACGAATT CCGAGTCGAC
CCGCCGCAAC CCCAATTTGG AGCCAACCCG CTGCTGGCCA TGGACCCGGT GGGAAATTTT
GCAGTGACAT GGGTTAGCAC CTCTGCCGCG ACCGGGTGGG ACGTCATGGT GCGCTCCTTC
AAGATGGACA CCCGGCCGCC CCTTGTGCAG CTCCTGGACA ACCAGGCCGT CCAAGGCCTG
GCCGGCGGCA CCGACAGCTG GAGCTACTAC AGGATCACCG TCCCACCCGG CGTCGCGCAA
CTCAACGTCA ACATGACCGG CCCCGTCGGC GGTGGTGATG GCGACATGTA CGTCCGCCTC
GGCGCACTTC CGTCGTTGAC GGCCTGGGAC TATCGCCCCT ACGTAAACGG CAGCAACGAA
GCCATCGCGA TCAGCAATCC CCTGCCTGGC GACTTCTACA TCGCGATCCA CGGGCGCAGC
GCGTACTCGT CGGTCGGCCT GACCGCCAGC TACGACTGA
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| Protein sequence | MSLGCLSGFA AASLAQAAPL GDPFMVNTAT AGNQRPVYFS AGSNGEKLLI WSDAAANATY
AQRIRSSGTP YLTKHLIQAP PAYANFSVDR IGNFVFGSEP GRVTAYDRSG TLLSSFQTTP
DSSSTVASMD TDGNITAAYS RSASEGAPRT IAIRRFNTRG VPIGPEVIVA SDAPDKLSGP
SSIATDDAGN IALSFATRPG PTANQSNIMI QRFSRAGVAL TPALVVGAIR SIYSSGGRIA
MDPGGRSVIS WSASQDDNYT WNIYARPYDA NGNPSSGLVR VNQRIHEGQP WPNPGVAENG
DFVVSWIASS GVVGGPQTST LAARQFRSDG TPIADEFRVD PPQPQFGANP LLAMDPVGNF
AVTWVSTSAA TGWDVMVRSF KMDTRPPLVQ LLDNQAVQGL AGGTDSWSYY RITVPPGVAQ
LNVNMTGPVG GGDGDMYVRL GALPSLTAWD YRPYVNGSNE AIAISNPLPG DFYIAIHGRS
AYSSVGLTAS YD
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