| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5699 |
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| Symbol | |
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| ID | 7975752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 414008 |
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| End bp | 414991 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796281 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947555 |
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| Protein GI | 239820370 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.537325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT TCGCAAGGGC CGCGATGGCC CTGTCGGCCA TGGCGCTCGC CGCCGCATCC
TCGCTGGCGC AGCCCAAGGC CGACTATCCG CACAAGCCCA TCGTGCTGGT CGTGCCGCAG
CCCGCGGGCG GCGCGGCCGA CCAGTTCGCG CGGCCCTTCG GCCAGGCGCT GTCGCAGCGG
CTGGGCCAGC CGGTGGTCAT CGACAACCGG CCGGGCGCCA ACGGCAACAT CGCGGCCGCC
TACGTGGCGC GCAACCAGCC GGCCGACGGC TACACCATCT TCTTCGGCTC GGTCAGCACG
CTGGCCGTGA ACCCGCACCT CTACAAGGCC ACGGGCTTCG ACGCGCTGAA GGACTTCCAG
CCGATCACGC TCACCAACCA GACGCCCAAC GTGCTGGTGG TGGGCGCGGG CACGCCCTAC
AAGACCGTGG CCGACGTGGT GGCGGCCGCC AAGAAAGAGC CTGGCACGCT GAGCTTCGGC
TCGGCCGGCA ACGGCAACAC CATGCACCTC ACGGGGCTGC AGTTCGAGGC GAAGACGGGC
ACCCGGCTGA TCCACGTGCC CTACAAGGGC GGCCCCGCCG CGCTCAACGA CGTGATGGGC
GGGCAGATCC CGATGATGTT CCACAACCTC TCGGCCGTGC TGGGCCAGGA GAAGGGCGGC
CGCGTGCGCG TGCTGGCCGT GGCCGACACG CAGCGCTCGA AGCTGCTGCC CAACGTGCCG
ACCATGGCCG AGGCCGGCGC GCCCGGCGTG GTGCAGCTCG CATGGAGCGG CATGCTGGTG
CGCAGCGGCA CGCCCGCGCC GGTGGTCGAG CGGCTGCACA AGGAGATGGT TGCGATCCTG
AAGGAGCCCG CGTTCCGCAA GCCGCTGGAA GAGCAGGGCT TCGATGTACT CTCATCGACG
CCACAGGCGT TCGCCGAACG CCTGAAGGCC GACCACGCCT CGATGGGCGA GGTCATCAAG
GCCGGCAACG TGAAGATCGA TTGA
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| Protein sequence | MKKFARAAMA LSAMALAAAS SLAQPKADYP HKPIVLVVPQ PAGGAADQFA RPFGQALSQR
LGQPVVIDNR PGANGNIAAA YVARNQPADG YTIFFGSVST LAVNPHLYKA TGFDALKDFQ
PITLTNQTPN VLVVGAGTPY KTVADVVAAA KKEPGTLSFG SAGNGNTMHL TGLQFEAKTG
TRLIHVPYKG GPAALNDVMG GQIPMMFHNL SAVLGQEKGG RVRVLAVADT QRSKLLPNVP
TMAEAGAPGV VQLAWSGMLV RSGTPAPVVE RLHKEMVAIL KEPAFRKPLE EQGFDVLSST
PQAFAERLKA DHASMGEVIK AGNVKID
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