Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5676 |
Symbol | |
ID | 7975729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 382976 |
End bp | 383914 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644796259 |
Product | dihydrodipicolinate synthetase |
Protein accession | YP_002947533 |
Protein GI | 239820348 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.727841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTCCA TCGCGAATTA TCGCGGGATC ATTCCCGCCA TTTCCTGCCC TTTCACCGCG GACCACCGCA TCGATGAGCC GGCCCTGCGC AAGCTGGCCT CGTGGCTGGC GGGGCACGAC GGCGTGGTGG CGGTCATGAC CAACGGCCAC ACCGGCGAGG TGTTCTCGCT GACGCCGGCC GAACGCGCCG AGGTGACGCG CATCGTCGCC GACGAGCTGC GCGGCCGCAT GCCGGTGATC TCGTCGATCG TGTGCGAAGG CCTGGCCGAA GCCGCCGAGC ATGCGCGCGC CGCCCAGGCC GCCGGCGCGG CCGCGCTCGA CGTGATGCCG CCGCACCACT GGCTGCGCTT CGGCTTCACG CCAGGCCATG CGCTGCAGTA CTTCGAGGCC ATCCACCGCG CGGCGCCGGA GCTCGACCTG GTCTGCCACG TGTACCCGGC CTGGACCCGC GCCTCCTATT CGTCGCAATT GCTGGCCGAG CTGGCCCGCC TGCCCTACCT GCAGGCCTTC AAGGTCGGCC AGCGCGACAT GAACAAGTAC GCCCGCGACA TCCAGGCGAT CCGCGAGGCC GACGCCTCCA AGGCCATCCT CACCTGCCAC GACGAGTACC TGCTGGCTTC GATGGTGCAA GGCGTGGACG GCGCGCTGGT CGGCTTTGCC ACTTTCATCC CGCAACTGAT CATCGACCTG TGGAACGCGG TCAAGGCCGG CGACCTGAAG AAGGCGATGG CGGTGCAGGC CCTGATCACG CCGCTGAAGG ACGCGGTGTA CGGCGGCGGC GAGCCGACCG GCGAGGCGCA TGCGCGCATG AAGGGCGGCA TGTACCTGGC CGGCGTGCTC GACAACGCCA CGGTGCGCCC GCCGACCGAG GCGCCCAATG CGCGCGAGAT GGACGCGCTG CGCGCCGCCG TGGCGCAGGC CGGGCTGTCG AGGCGCTGA
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Protein sequence | MPSIANYRGI IPAISCPFTA DHRIDEPALR KLASWLAGHD GVVAVMTNGH TGEVFSLTPA ERAEVTRIVA DELRGRMPVI SSIVCEGLAE AAEHARAAQA AGAAALDVMP PHHWLRFGFT PGHALQYFEA IHRAAPELDL VCHVYPAWTR ASYSSQLLAE LARLPYLQAF KVGQRDMNKY ARDIQAIREA DASKAILTCH DEYLLASMVQ GVDGALVGFA TFIPQLIIDL WNAVKAGDLK KAMAVQALIT PLKDAVYGGG EPTGEAHARM KGGMYLAGVL DNATVRPPTE APNAREMDAL RAAVAQAGLS RR
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