| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5658 |
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| Symbol | |
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| ID | 7975711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 363719 |
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| End bp | 365509 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796242 |
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| Product | Alkaline phosphatase |
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| Protein accession | YP_002947516 |
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| Protein GI | 239820331 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCC ACGACGAGAA GAAGAACAAC GGCGAGGCAA GCCATGCCGT TCACGATGCA
GACACCGACC CCTCGCAAGC CCTGAGCGGC ACCACCCGGC GCTCGCTGCT GCGCAGCGCC
GTGCTGTTCG CGATGTTCTC GGGCAGCGGC ATCGGCCTGA CCGCCTGCGG CGGGGGCGGC
GGAGGAGGAG GAGGAGGGGG CATCGGCATC GGCGGCGGAG TGGGGGGCGG GCGTCCGCCC
GACGACTCCA ACTCGGTGTT CAAGCACGGG ATCGCGAGCG GCGATCCCCT GTCCGACCGC
GTGATCCTCT GGACCCGCGT GACGGCCGCC GCGCCGGGCA CCCTCAACGT CGAGTGGGAA
GTGGCCAGCG ACGAGCGCTT CGGCATCATC GTGGCGCGCG GCACCGCGAG CACCGGTCCC
GAGCACGACT ACACGGTCAA GGTGGACGCC ATGGGGCTCC AGCCGGCCAG CACCTATTTC
TATCGCTTCC TGATGGGCAA CGACCACTCG CCCATCGGCC GCACCCGCAC GCTGCCGGTG
GGCGGCGTAT CGCAGGCCAG GCTGGCGGTG GTGTCGTGCT CCAATTTCCC GAGCGGCTAC
TTCAACGTCT ATGCCGACAT TGCCAAGCGC ACCGACATCG ACGTGGTGCT GCACCTGGGC
GACTACATCT ACGAGTACGG GGTGGTGGGC TATGCGTCGC AGCTGGCCAT TGCGATCGAC
CGCACATCGA ACCCCGACCA CGAGATCCTG ACGCTCGCCG ACTACCGCCT GCGCCATGCG
CAGTACCGCA CCGACGGCGA CCTGCGCGCC CTGCATGCGC GGCTGCCCAT GATCGCGGTG
TGGGACGACC ATGACCTGGC CAACGGCGCA TGGTCCGGCG GCGCCGGGAA CCACGACGAA
GCAACCGAGG GCAGCTTTGC GGCCCGGCGC GCGGCCGCCG TGCAGGCCTA CCACGAGTGG
CTGCCGACGC GGCTGCCCGA CCCGGCGAAC CCGCTGCGGA TCTACCGCTC CTTCGACTTC
GGCACGCTGG CTTCGATGCA CATGCTCGAC ACCCGGCTGA TCGGCCGCGA CAAGCAGGTC
ACGCTCTCGC AGTACCTGGC CGGCGAGGCT TCGGCGGCCA CGCGGCAGCT GATGGGCCAG
CCGCAGGTGG ACTGGCTGTC CCAGCGCATG GCCGCATCGC CCTGCACCTG GCAGGTGCTC
GGCCAGCAGG TGCTCATGAT GCGCATGGCC ATCCCCGTGA GCATCGCGAC CGACTTCAGC
CTCGAGACGC TGAGCGCCTA CCTGGCGGCG CAGGCGCTTC CGGATTCCGC CCGCAGCGAC
AGCCAGCGCG CGCTGATCAC GCAGCAGAAG GTGCCCTACA ACCTGGACGC GTGGGACGGC
TACCCGGCCG CGCGCGACGT GGTGCTCGCC ATGGCGCGCA ACCAGGGCAA GAACCTGATC
TCGCTGGCCG GCGACACGCA CAACGCCTGG GCCGGGAACC TCACCGACGC CTCCGGGCAG
CGGGTCGGCG TGGAATTCGG AACCTCGTCG GTGTCGTCGC CCGGCTTCGA GCGGGCGCTG
CCGCTGATTG CCAACGACCT GCTGGCCGAT GGCTTCCGGC GCATGGTCGA CGACCTGCGC
TACGCCGAGA CCAGCAAGCG CGGCTATGCG GTGCTGACCC TCACGCCGGC CGAAGCGCGC
TGCGACTACA TCGAGATCAG CACGGTGCTG AGCCGCGACT ATTCGGTGAG GACCGCAGCC
ACGCTGCGCG TGCTGCCCGG TGTCGGCAAC CTGCAGGTGC TCGCTGCCTG A
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| Protein sequence | MRIHDEKKNN GEASHAVHDA DTDPSQALSG TTRRSLLRSA VLFAMFSGSG IGLTACGGGG
GGGGGGGIGI GGGVGGGRPP DDSNSVFKHG IASGDPLSDR VILWTRVTAA APGTLNVEWE
VASDERFGII VARGTASTGP EHDYTVKVDA MGLQPASTYF YRFLMGNDHS PIGRTRTLPV
GGVSQARLAV VSCSNFPSGY FNVYADIAKR TDIDVVLHLG DYIYEYGVVG YASQLAIAID
RTSNPDHEIL TLADYRLRHA QYRTDGDLRA LHARLPMIAV WDDHDLANGA WSGGAGNHDE
ATEGSFAARR AAAVQAYHEW LPTRLPDPAN PLRIYRSFDF GTLASMHMLD TRLIGRDKQV
TLSQYLAGEA SAATRQLMGQ PQVDWLSQRM AASPCTWQVL GQQVLMMRMA IPVSIATDFS
LETLSAYLAA QALPDSARSD SQRALITQQK VPYNLDAWDG YPAARDVVLA MARNQGKNLI
SLAGDTHNAW AGNLTDASGQ RVGVEFGTSS VSSPGFERAL PLIANDLLAD GFRRMVDDLR
YAETSKRGYA VLTLTPAEAR CDYIEISTVL SRDYSVRTAA TLRVLPGVGN LQVLAA
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