Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5618 |
Symbol | |
ID | 7975230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | - |
Start bp | 324202 |
End bp | 324936 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644796202 |
Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
Protein accession | YP_002947476 |
Protein GI | 239820291 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCG ACAAACCCAC GAAGCAGAGA CAACTCACCG TACGAATCTC TCGAGGAACC GGCGATGGCT CCTTGTCGAC GTACTCGGTC CCCTGGCGCG AAAACCAGAC CGTGCTGGAC GTCGTGACGG AGGTCCAACG GACCCAGGAG CCAGACCTTT CCTATCGATT CGCGTGTCGC GTTGGCGTGT GCGGCTCCTG TGCGATGACG GTCAACGGAA AGCCCCGCTG GACCTGCCGA ACCCATGTCA GCCGCGTGGA AGAGGGGGGG GTCATCGTCA TCGAGCCCCT TCGCAACATG CCGCGCATCA AGGACCTCGT GGTCGATATG CGCGAGTTCT TTCAAAAGTG GAAAAAGGCG GGCAGTACCT TTGTTGGCAC GGCAACACGG AATGATCCGC CGGCACGGGT GTCTCCCCAG AGCAAGAAGC GCAGGCTGGC AGATGCCGCG ATCGAATGCA TCAATTGCGG CGTGTGCTAT GCCGCCTGTG ACGTCGTCAC CTGGGACAAG GACTACCTGG GACCAGCCGC GCTCAATCGT GCCTGGACCC TCTACAACGA CGAACGGCAT GCGGATCCCA AGGACGTTTT GCACAAGGCC ACGTCCGGTG GCGGCTGCAA TTCGTGCCAC ACGCAAGGCA GTTGCATGAA GCATTGCCCG GTCAGCCTGA GCCCGACCGG CAGCATTGCG GGACTGAAGC GAAGTGCGCT CCTGAGTTTC CTCAAGCGAG ACTGA
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Protein sequence | MDTDKPTKQR QLTVRISRGT GDGSLSTYSV PWRENQTVLD VVTEVQRTQE PDLSYRFACR VGVCGSCAMT VNGKPRWTCR THVSRVEEGG VIVIEPLRNM PRIKDLVVDM REFFQKWKKA GSTFVGTATR NDPPARVSPQ SKKRRLADAA IECINCGVCY AACDVVTWDK DYLGPAALNR AWTLYNDERH ADPKDVLHKA TSGGGCNSCH TQGSCMKHCP VSLSPTGSIA GLKRSALLSF LKRD
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