| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5541 |
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| Symbol | |
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| ID | 7975398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 244176 |
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| End bp | 245072 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644796126 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947400 |
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| Protein GI | 239820215 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCG GAACGAGACC CATCGATATC GAGCAGGTCC AATATCGGCC CTCGGCCGAG
AGCACACTGG ATCTCGAGGT CTTCTCTATG TCGGACTTAA GACGAAGGGT GCCCCAAGCC
CACCTCCAGC GTCACCACCG CTACGACTTT CACATGTTCG TGCACGTCAG ACGCGGGAAA
TGCCGCGCTG TGGTGGACTT CAGGCACATC GAGTGTGGCG CGGGATCGCT GCTGACCATC
CGGCCCGGAC AGGTTCACCG CTTCGGCCCG GGAAGCCGCT GGGACGCAAA CCTCCTGCTG
TTCAGACCCG AACTGCTGCA GGCTTCGCAA GGCGAGGAAC GCCTTCAGAT GCCTGAACTG
ATCGATGCGC TTCCTGGCCA TCTGCGCCTC GATCGGTCGA CGGGTCGGTT CTTGGCCGAC
ACGCTCGCGC GGCTCGAGGA GGAGTGCGTG CTCGAAGCCC GGCAACCGCT GCTGAACTGG
CTGCTCCAGA GTGAACTGGC AACGCTCGTG ATGCGGCTGC ACATCTTTCA CACCGAGCAA
CAGCCGCCCG CTGGAGCATC GGCCGACGCG CCGGAGCGCT TTCGTCTTTT CAAACGGCTT
TTGGACGCGA AGGTGCATCA GTGGCATCAC GTTTCGCGCT ATGCACATGC CATGGGATGT
TCCGAGAAGA CTCTTACTCG CATCTGCAGT GCGGTGGCTG GCGTCGGTGC GAAGGCCTTT
ATTGCCTCGC GCCTTGCGTT GGAAGCCAAG CGCCTGCTCG TACATACGGA GACGCCGATT
TCCGTCATCG CGCAGCGGCT TGGCTTCGAT GAGGCGACCA ACTTCACCAA GTTCTTTCGC
AGCATTGAAG GATGCACGCC AGGCGACTTC CGCCGTCGGT TCGATGTCTC GTTGTAG
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| Protein sequence | MPRGTRPIDI EQVQYRPSAE STLDLEVFSM SDLRRRVPQA HLQRHHRYDF HMFVHVRRGK
CRAVVDFRHI ECGAGSLLTI RPGQVHRFGP GSRWDANLLL FRPELLQASQ GEERLQMPEL
IDALPGHLRL DRSTGRFLAD TLARLEEECV LEARQPLLNW LLQSELATLV MRLHIFHTEQ
QPPAGASADA PERFRLFKRL LDAKVHQWHH VSRYAHAMGC SEKTLTRICS AVAGVGAKAF
IASRLALEAK RLLVHTETPI SVIAQRLGFD EATNFTKFFR SIEGCTPGDF RRRFDVSL
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