| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5513 |
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| Symbol | |
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| ID | 7975370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 213955 |
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| End bp | 215250 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796099 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_002947373 |
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| Protein GI | 239820188 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAC AGCAAGACCT CCTGCGCGAC GCGATGCGCC GCCTCAATCT CACGCGCGAC
GCATTTTCCG AACGGCTGGG CGTGCGCCGC CGTGCGCTCG ACACCTGGCT GCTGCCGTCC
GATTCGAGTG AGTCGCGGGC GATGCCGGAG ATGGTCGGCA AGTTCGTTGC CGAGATTCTT
CAGCGCGAGG CGCTCGACAC CGGCGCCGGC CCGGTGGGCA CGGGGCAGCG CCCGCTCGCG
CAGCGCATCG CGGCCGAAGG CAAGCCGCAG CTGCTGTCGG TCGCGCAGTT CGACCGCGGC
AGCCTCGAGG ACCTGTTCCA TGTGGCCGAC GTGATGCAGC CGATCGCGCG CCGGCAGAAA
GTCACGCGCA TCCTCGAAGG CGCCGTGCTC GGCAGCCTGT TCTTCGAGGC CAGCACGCGC
ACGCGCGTGA GCTTCGGCGC CGCCTTCTGC CGGCTCGGCG GCACGGTGTG CGACACCACG
GGCTTCACCT TCTCGTCGAT GGCCAAGGGC GAGTCGATCT ACGACACCAG CCGCGTGATG
AGCGGCTATG TCGACGCGCT GGTGGTGCGC CATCCGGAGC AGGGCTCGGT GGCCGAGTTC
GCGCGCGCCA CCAACATCCC GGTCATCAAC GCCGGCGACG GCCCCGGCGA ACACCCGAGC
CAGGCCATCC TCGACCTGTA CACCATCCAG CGCGAGTTCT CGCGCATGGG CAAGCTGGTC
GACGGCACGC ACGTGGCGAT GGTCGGCGAC CTCAAGTACG GCCGCACGGT GCATTCGCTG
ATCCGGCTGC TGGCGCTCTA CCGCGGTCTC AAGTTCACCC TGATTGCGCC GCCCTCGCTG
GAGATGCCGG CCTACCTGGT CGAGCTGGTC GCGCGCAACG GCCACGTCGT CGAGCAGACC
TCCTCGCTGG CACAGGGGCT GCGCGGAGCC GACGTGGTCT ACGCCACGCG CGTGCAGAAG
GAGCGGTTCG CGAACGGAGA AACGCTGGAG GGCTACACGC CCGAGTTCCA GGTGTGCAAG
GCCCTGGTGG ATGCAGCCTG CAAGCCCGAC ACCATCCTGA TGCACCCCTT GCCGCGCGAC
GGGCGTCCGG GCGCGAACGA CCTGAGCGTG GACCTCAACC ACGATCCGCG GCTGGCGATC
TTCCGGCAGA CCGACAACGG CATCCCCGTG CGCATGGCGA TCTTCGCGGT GCTGATGGGC
GTGGAGCAGC AGGTCGCGCG TTCGATGCGC GATGCCAGCT GGCGCTCGCC CGCGCACATC
GGTCCCGACG ACGCCGACTT CGACGGGCTC GACTGA
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| Protein sequence | MSQQQDLLRD AMRRLNLTRD AFSERLGVRR RALDTWLLPS DSSESRAMPE MVGKFVAEIL
QREALDTGAG PVGTGQRPLA QRIAAEGKPQ LLSVAQFDRG SLEDLFHVAD VMQPIARRQK
VTRILEGAVL GSLFFEASTR TRVSFGAAFC RLGGTVCDTT GFTFSSMAKG ESIYDTSRVM
SGYVDALVVR HPEQGSVAEF ARATNIPVIN AGDGPGEHPS QAILDLYTIQ REFSRMGKLV
DGTHVAMVGD LKYGRTVHSL IRLLALYRGL KFTLIAPPSL EMPAYLVELV ARNGHVVEQT
SSLAQGLRGA DVVYATRVQK ERFANGETLE GYTPEFQVCK ALVDAACKPD TILMHPLPRD
GRPGANDLSV DLNHDPRLAI FRQTDNGIPV RMAIFAVLMG VEQQVARSMR DASWRSPAHI
GPDDADFDGL D
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