| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5507 |
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| Symbol | |
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| ID | 7975364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 210113 |
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| End bp | 211072 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796094 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947368 |
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| Protein GI | 239820183 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTACC GCAAACTCGT GATCGGGCTG GCGCTGGGTG CCTGCGTGCT CGTCGCGCCC
GCACTCGCCC AGCAGGTGAC CCGCATCGTC GTGCCCTTTG CCGCCGGCGG CGGCACCGAC
CAGTACTGCC GCATCCTGGC CCAGGAGCTC AACAAGCAGG GCCTGAACGT CATCATCGAG
AACAAGCCCG GCGCAAGCGG CATCCTCGCC GCCGACTACG TCGCGCGCGC CAAGCCCGAC
GGGCAGACGG TGCTCGTGTC CTCGCTGGGC ACGCTCGCGA ACAACAGCGT GCTCTACGAC
AAGCTGCCCT ACGACCCCGC GAAGGACTTT GCGGCCGTCA CGCAGATCGC CTACCAGCCC
GCCATCGTCG TCGGACGCAC CGACCTGCCC TACAAGAACA TCAAGGAAAT GGTGGCCTAT
GCCAAGCAGA ACCCCGGCAA GATCAACCGC GGTTCGCCGG GCGCGGCCAT CCTGACCAAC
CTCGCGCCCA TCGCTTTCGA GAAGGAACAA GGCTTCAGCA CGCTGCACAT TCCCTTCAAC
GGCGATGCGC CCGCGCTGCA AGCCCTGCTG GGCAACCAGA TCGACATCCA CGGCACCTCC
ATCACGGGAT CGCTGCCCTA CGTGAAGGCC GGCAAGCTGC GCGTGCTGGG CGTGATGGAT
TCGAAGCGCC TGCCGCAGGT GCCCGACGCA CCCACCTTCA AGGAGCAGGG CTTCGACATG
GAAGCCACGC TCTGGTATTC GCTCTCGGTG CCCGCCGGCA CGCCGCGGCC CGCAATCGAG
CGCCTGAACA AGGCCGTCAA CCAGGTGATC GCCGACCCCG ACTTCGTGGC GCGCGCCCGC
GCCATCGGCA TGGAGCCGCG CGGCGGCACG CCGGAGGAGC TCGACAAGTT CATCAAGGCC
GAGGCGGACC GCTGGCTTCC CGTGCTGCGC GGGCTGAACT TGCCGAAGCA GTCGCACTGA
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| Protein sequence | MSYRKLVIGL ALGACVLVAP ALAQQVTRIV VPFAAGGGTD QYCRILAQEL NKQGLNVIIE
NKPGASGILA ADYVARAKPD GQTVLVSSLG TLANNSVLYD KLPYDPAKDF AAVTQIAYQP
AIVVGRTDLP YKNIKEMVAY AKQNPGKINR GSPGAAILTN LAPIAFEKEQ GFSTLHIPFN
GDAPALQALL GNQIDIHGTS ITGSLPYVKA GKLRVLGVMD SKRLPQVPDA PTFKEQGFDM
EATLWYSLSV PAGTPRPAIE RLNKAVNQVI ADPDFVARAR AIGMEPRGGT PEELDKFIKA
EADRWLPVLR GLNLPKQSH
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