| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5500 |
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| Symbol | |
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| ID | 7975357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 203013 |
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| End bp | 204173 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796087 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002947361 |
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| Protein GI | 239820176 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCG ACTACGCCGG CTTCCGGCGC GAACTCGAAG CGTTCGCGCG CGACGCCTGC
CCGCCCGAGA TCCGCGCCGT GGTCGCGGCC GGCCAGAAGA TCACCAAGCG CGAATACCAG
GCCTGGCAGA AAATTTTGAA CGCCCGGGGC TGGGGCGCGC CGAGCTGGCC GCGCGAAGCG
GGCGGCACCG GGTGGGACAT CCGCCAGCGC CTGATCTTCG AGGAGGTGAT GGCCGAGAAC
GACTGCCCGC CGCTCTACCA CCATGGGCTG GGCCACATCG GCCCGGTGAT CATCCGCTTC
GGCACGCCCG AGCAGAAGGC CCGCTTCCTG CCGCGCATCC TCGACGGCTC CGACTGGTGG
TGCCAGGGCT ATTCGGAGCC CGGCTCGGGC TCCGACCTGG CCTCGCTGTC CACCGGCGCG
CGGCTGGAGG GCGGCGAGTG GGTCGTCAAC GGCCAGAAGA TCTGGACCTC GCATGCCCAC
GAGGCCAGCA TGATCTACAT GCTGGTGCGC ACCTCGAAGG AAGCGAAGAA GCAGGAAGGC
ATCTCGCTGC TGCTGGTGCC CATGGACACG CCGGGCATTA CCGTGCGTCC GATCAAGACC
ATCGACGGCT GGCACCACCT GAACGAGGTC TTCTTCGACG AGGTGCGCGT GCGCGCCGAC
AACTTGCTCG GCGAGGTCGG CAAGGGCTGG ACCTGCGCCA AGTTCCTGCT CGAGCGCGAG
CGCCTGCCGC CGGCCAACGT GGCGCGGCTG GAGCTCATGC GCCGGCAGGT CACGCGGCTG
GTCGAGGATG CGAGCCGGGC CGCCGCGGGC CGGCGCGACT TCAGCGGCCT GCACCACAAG
CTGCTGCTGT GCGAGGCCGA TGTGAAAGGC GCCCGCGTGA TGATGGCCGA GGCCACCGAC
GACCTGATCC ACCAGCGCCC GCTGGGCGTG CAGCCTTCGG TCATCAAGAT GACCTGCGCC
GACGTGGCGC AGCGCCTGAC CACCATCGCC CTCGATGCGG TCGGCCCCGA CGCGGCGCAC
CGCTTCCTTG CCGAGGCCGG GGAGGACGTG CCCGACGCCA CCTGGATCCA GAACTACATG
TTCACGCGCG CCCGCACCAT CGCCGGCGGC ACCTCCGAGG TGCAGCGCAA CGTGGTCGCC
AACGAACTGC TGGGAGCCTG A
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| Protein sequence | MSIDYAGFRR ELEAFARDAC PPEIRAVVAA GQKITKREYQ AWQKILNARG WGAPSWPREA
GGTGWDIRQR LIFEEVMAEN DCPPLYHHGL GHIGPVIIRF GTPEQKARFL PRILDGSDWW
CQGYSEPGSG SDLASLSTGA RLEGGEWVVN GQKIWTSHAH EASMIYMLVR TSKEAKKQEG
ISLLLVPMDT PGITVRPIKT IDGWHHLNEV FFDEVRVRAD NLLGEVGKGW TCAKFLLERE
RLPPANVARL ELMRRQVTRL VEDASRAAAG RRDFSGLHHK LLLCEADVKG ARVMMAEATD
DLIHQRPLGV QPSVIKMTCA DVAQRLTTIA LDAVGPDAAH RFLAEAGEDV PDATWIQNYM
FTRARTIAGG TSEVQRNVVA NELLGA
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