| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5491 |
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| Symbol | |
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| ID | 7975348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 193867 |
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| End bp | 194829 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796078 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947352 |
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| Protein GI | 239820167 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCCCA GACACCACGA CACGGCCGCC GAGGGCAGGC CACCACAGCA CGCGATGGCG
CAGGTCATCG GCGCGCGCAC GCCGGGCGCG GGCGATTTCG AAACACCGAT CGCGGGCCTG
GCCTTCTTCA GGCGCGAATG CCCCGCGCCG CCCGCCGTCT GCATGCTCGA GCCGAGCATC
GTGCTCGTTG CCCAGGGCGC CAAGCAGATG TGGGTGGGCG GCGAGGCCTA TGCCTACGAC
ACCTCGCGGT TCCTCGTCAC CTCGCTGAAC GTGCCCGCCA ATTCGGAGGT GATGGTGGCA
AGCCCCGGGC AGCCCTGCCT GGGCCTGGTC TTGACGCTCG ACGTGCGCAT ACTGGCCGAG
CTGATTGCGC AGGGCGGCCT GCCGCCGCCG CGCGATCGCC CGGTCGGCGT GGGGGTGGGC
ATCGGCGCGG CCACGCCTGC GATCCTGAAC CCGTTCGCGC GCCTGCTCGA ACTGCTGGAC
GAGCCGCATG CCATTCCCGT TCTTGCCCCG CTGATCCAGC GCGAGATCCA CTACCGGCTG
TTGATGAGCG ACCAGGCCGC GCGGCTGCGG CAGATTGCCT CGGTGGACGG GCAGGGCTAC
CGGATCGCGC GGGCCATCGA CTGGCTGAAG CTGAACTACG CCTTGCCGCT TCGCATCGAC
GAACTCGCGG CGCGCGTGCA GATGAGTGCG CCCACCTTCC ACCATCACTT TCGCCAGCTC
ACCGCGATGA GCCCGCTGCA GTACCAGAAG TGGCTGCGGC TGAACGAAGC AAAGCGCCTG
ATGCTGAGCG AACACTTCGA TGCCGCGGGC GCGGCGTTCA GGGTCGGCTA TGAAAGTCCT
TCGCAGTTCA GCCGCGAGTA CAGCCGGCTG TTCGGTGCAC CGCCCACGCG AGACATCGAG
GTGCTGCGAG GGGCGGCCAG GGGCACCGAT ATGCCCAGGC ACGCGCTGGC GAACCCGGCA
TAG
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| Protein sequence | MVPRHHDTAA EGRPPQHAMA QVIGARTPGA GDFETPIAGL AFFRRECPAP PAVCMLEPSI
VLVAQGAKQM WVGGEAYAYD TSRFLVTSLN VPANSEVMVA SPGQPCLGLV LTLDVRILAE
LIAQGGLPPP RDRPVGVGVG IGAATPAILN PFARLLELLD EPHAIPVLAP LIQREIHYRL
LMSDQAARLR QIASVDGQGY RIARAIDWLK LNYALPLRID ELAARVQMSA PTFHHHFRQL
TAMSPLQYQK WLRLNEAKRL MLSEHFDAAG AAFRVGYESP SQFSREYSRL FGAPPTRDIE
VLRGAARGTD MPRHALANPA
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