Gene Vapar_5427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5427 
Symbol 
ID7975121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand+ 
Start bp133311 
End bp133928 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID644796015 
ProductGlutathione transferase 
Protein accessionYP_002947289 
Protein GI239820104 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT ATCACATGCC CGGCGCCTGC TCCCTCGCCG ACCTGATCGT TCTCCAGTGG 
ATCGGCGCCG ACCACGAGCC GGTTCGCATG AGCCTGGACA GCATCAAGTC GCCCGACTAC 
CTTGCCATCA ATCCGGGCGG CACGGTGCCG CTGCTGGCGC ACGGCGATCT CTCGCTCACC 
GAGAACGTCG CCATCCTCGG CTACCTGGCC GACCTGTACC CCGAGGCGCG CCTGCTGGGC 
GACGGCTCGC CGCGAGCGCG CGCCGAGGTC ATGCGCTGGC TGGGCTTTCT CAACTCGGAC 
GTGCACAAGG CGTTCAAGCC GATCTTCACG CCGCAGCGCT TCCTGAAAGA CGCGGCGATG 
GCGCCCGTCC TTGCGGACAA CGCGCGCGGC CATGTGCGCG AATACCTCGC GCGGCTGGAC 
GGCCAGCTCG AGGGGCGCGA CTGGCTGACC GGCGAACGGT CCATCGCGGA CCCGTACCTG 
TTCGTGCTCT CGCGCTGGTC GGCGGCCAAG AAGGTCGACA TGCAGGGCCT GGACAACCTC 
GCGCGCTTCG CCCGGATGAT GGACGCCGAC GCCGGCGTGC AAGCCGCGCT GGACGCCGAG 
CGCAGCATGC CACAGTAA
 
Protein sequence
MKLYHMPGAC SLADLIVLQW IGADHEPVRM SLDSIKSPDY LAINPGGTVP LLAHGDLSLT 
ENVAILGYLA DLYPEARLLG DGSPRARAEV MRWLGFLNSD VHKAFKPIFT PQRFLKDAAM 
APVLADNARG HVREYLARLD GQLEGRDWLT GERSIADPYL FVLSRWSAAK KVDMQGLDNL 
ARFARMMDAD AGVQAALDAE RSMPQ