| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5420 |
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| Symbol | |
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| ID | 7975114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 125933 |
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| End bp | 126856 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796008 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947282 |
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| Protein GI | 239820097 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.691388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACC TGAAGGATGT CTTCTATTTC GTCCAAGTCG TCGACCGCGG AGGCTTCACG
GCCGCCGGGT CGGCGCTTCG CCTGCCGAAG TCGACGCTGA GCCATCGCGT CCAGGAGCTC
GAGAGTTACC TGGGCGTGCG CCTGCTCAAC CGAACGTCCC GCCAGTTCGG CATGACCGAC
ATCGGCAAGG AGTTCTACCA GTATGCGGTC GCGATGCTGC ACAGCTCCGA CGTGGCCGAG
GAGGCGGTGC GCCAGCGCCT GGCCGAACCC AGCGGCGTGA TCCGGCTGAC CACGGCCGTG
GAGATTGCGC AGTTCGCGCT GCGCGAGATT CTTCCCGTCT TCCTGAACCG GTATCCCAAG
GTGCGCATCG TCGAGATCGC GACCGACCGC TACGTGGACA TGGTGGGCGA AGGCTTCGAT
CTGGCGATAC GCGGGCACAC GGGATCGCTC CAGAACTCCA CGCTGGTGCA GCGCGCGCTG
GCCGATGTTC CCTGGTACCT GTTCGCAAGC CCGGGGTACC TCGCGCAAAG CGGTGTGCCC
GAGAGCCCCG CGGACCTTGG CCAGCACGCG AGCGTTGCGA TGGTGCGCAA TGGTCCGTTG
CAGTGGCAGC TGAAAGGGCC GCACGGCGAA GAGCTCGCCA TGCCCATCGA CCCGCGCTTC
CAGAGCAACA ACATGGTCGC GCTGAAGGAG GCGGCCTGCG CCAGCCTGGG CATCGCTGCG
CTTCCGGGCT ACATCTGCAG GTCGGAGCTC CGGGACGGGA CCCTGCAGCA ACTGCTGCCC
GACTGGTCGG CGGCCGATGC GCGCATCTCG GCGCTGATTC CGTTTCGCAC CGGCCTGCTG
CCCGCGGTGC GTTCGCTGGT CGATTTTCTC GCTGTGGAAA TGCCGGTGGT CACGGCATTC
GACCATCCCC GCAGCTTCGA GTGA
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| Protein sequence | MLDLKDVFYF VQVVDRGGFT AAGSALRLPK STLSHRVQEL ESYLGVRLLN RTSRQFGMTD
IGKEFYQYAV AMLHSSDVAE EAVRQRLAEP SGVIRLTTAV EIAQFALREI LPVFLNRYPK
VRIVEIATDR YVDMVGEGFD LAIRGHTGSL QNSTLVQRAL ADVPWYLFAS PGYLAQSGVP
ESPADLGQHA SVAMVRNGPL QWQLKGPHGE ELAMPIDPRF QSNNMVALKE AACASLGIAA
LPGYICRSEL RDGTLQQLLP DWSAADARIS ALIPFRTGLL PAVRSLVDFL AVEMPVVTAF
DHPRSFE
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