| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5405 |
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| Symbol | |
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| ID | 7975866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 109615 |
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| End bp | 110439 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795994 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002947268 |
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| Protein GI | 239820083 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0752119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC TCTCCAGTCT CGCACGCGCA TTCACAGCCA TCGGCATCCT GGCGCTGCAC
CTGTCGGCAC CTGCAGGCGC GGCCACATCG GGCGCGCCGG CAAAGCCCAC TGTCGTGCTG
GTCCACGGCG CCTTCGCCGA ATCGGCCAGC TGGAACGAGG TGGTGCGCGA CCTTCGTGCG
CGCAGCTTTC CCGTTGTCGC GGCCGCCAAT CCGCTGCGCG GCGTGAAGTC CGACGCGGAC
TATGTGGCTG CCCTCGTGGG GTCGATCCCC GGGCCGGTCG TGCTGGTCGG GCATTCGTAC
GGCGGCTTGG TGATTTCCGC TGCGGCGATT GGAAAGCCCA ATGTCCAGGC CCTGGTCTTC
GTGGCTGCGT TCGCCCCCGA AGTGGGCGAA TCGGCGGCCG ACCTGTCGGG CAAGTTTCCC
GGCAGCACGC TCGGCTCGGC GCTGGCGGCG CCGGTGCTCC TGCCGGACGG CGCCAAGGAC
CTCTACATCC TGCAGGACAA GTTCGGCAAG CAATTCGCCG AGGACGTGCC GCCGGCGCTC
GCCCGGTTGA TGGCCGTGTC GCAGCGCCCC ATCACAGAGG GCGCCCTGGG CGAAGCGTCG
CCTGCCGCCG CCTGGAAGAA CCTGCCCTCC TGGTTCATCT ACGGCGACCG CGACAAGAAC
ATTCCGGCTG CCGCGCAGGC CTTCATGGCC GAGCGTGCCA AGTCGATGAA GACGGTCGTG
GTCAAGGGCG CTTCCCACGT GGTCATGATC TCGCGGCCGA AGCTGGTGGC CCGGCTGATC
GTCGAAGCCG CTGACGCGGT CGCGGTCGCG ACGGCAATGC CCTGA
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| Protein sequence | MKNLSSLARA FTAIGILALH LSAPAGAATS GAPAKPTVVL VHGAFAESAS WNEVVRDLRA
RSFPVVAAAN PLRGVKSDAD YVAALVGSIP GPVVLVGHSY GGLVISAAAI GKPNVQALVF
VAAFAPEVGE SAADLSGKFP GSTLGSALAA PVLLPDGAKD LYILQDKFGK QFAEDVPPAL
ARLMAVSQRP ITEGALGEAS PAAAWKNLPS WFIYGDRDKN IPAAAQAFMA ERAKSMKTVV
VKGASHVVMI SRPKLVARLI VEAADAVAVA TAMP
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