| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5353 |
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| Symbol | |
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| ID | 7975814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 57661 |
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| End bp | 58251 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795947 |
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| Product | DSBA oxidoreductase |
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| Protein accession | YP_002947221 |
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| Protein GI | 239820036 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.39652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT CAGTCGATTT CTTCTTCGAT GTCGGAAGCC CGTCGTCGTA CCTGGCATGG
ACGCAGCTGC CTGCCCTGTG CGCAAGCCAC GGCGCCGAGC TCGTCTACCG GCCGATGCTG
CTGGGCGGCG TCTACCAGGC CACGGGCAAC GCCTCGCCGG CCACCATTCC CGTCAAGGGC
CGCTATACGC AGATGGACTA CGAGCGCCAT GCGCGCCGCT ACGGCGTGCC GTTCCAGGGC
AACCCGCACT TCCCGGTCAT CACGCTGTTC CTCATGCGTG CGGTCACCGG CATTCAACTG
CGCCGGCCCG AACAGCTGCA GCTGCTGCTG GGCTGCGTGT TCAAGGCGCT GTGGATCGAT
GCGCTCAACC TGAACGATGC GCAGCTCACC GCCCGCACGC TGGCCGAAGG CGGGTTCGAC
CCCGCCGAGA TCGAGCGCCT GGCGCAGGAC GCCGAGACCA AGGCCGCATT GAAGGCAACC
ACGCAGGAGG CGGTCGAGCG CGGCGTGTTC GGCGCACCCA CGCTCTTCGT CGGCGACCAG
ATGTTCTTCG GCCAGGACCG GATGGATTTC GTTCGCGAAG CGCTGTCCTG A
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| Protein sequence | MSKSVDFFFD VGSPSSYLAW TQLPALCASH GAELVYRPML LGGVYQATGN ASPATIPVKG
RYTQMDYERH ARRYGVPFQG NPHFPVITLF LMRAVTGIQL RRPEQLQLLL GCVFKALWID
ALNLNDAQLT ARTLAEGGFD PAEIERLAQD AETKAALKAT TQEAVERGVF GAPTLFVGDQ
MFFGQDRMDF VREALS
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