| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5350 |
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| Symbol | |
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| ID | 7975811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 54263 |
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| End bp | 55177 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795944 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947218 |
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| Protein GI | 239820033 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.57185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCTCA AGGACATCGA CCTCAACCTG CTGGTGGTGT TCAACCAGTT GCTGATCGAC
CGGCGGGTGT CGAAGGTGGC GGCGAATCTC GGCCTCTCGC AGCCGGGCGT GAGCAACGCG
CTGGCGCGCC TGCGCAAGCT CACCGACGAC CCGCTGTTTC TCAGAACGCC AAAGGGCATG
GAACCGACGC CTTTCGCCGA GCAGCTGGCC GCGCCGACCG CGAGCGCGCT GCAGACGATC
CATGCCGCCA TCAACCAGCG CAGCTCGTTC GATCCGGCCA CCTCGGCGCG CGCCTTCACC
ATCGGCATGA CCGACATCGG GGAGATCTAT TTCCTGCCCA AGCTGATGCA GGAGCTGGCG
CGCGTGGCGC CGGGCCTGTC GATCAGCACC GTCCGCAACA CGGCGGTCAA TCTCCAGGAC
GAGATGGAGT CCGGCCACGT CACGCTGGCC ATCGGCCTGC TGCCGCAGCT GAAAAGCGGC
TACTTCCAGC GCCGGCTCTT CAAGCAGCAC TACGTCTGCA TGTTCCGCCG CGGGCATGCG
CTCGACAAGC GCCAGATCTC GCTGGCCGAG TTCTCAAGGG CCGATCACGT GGTCGTGGTG
TCGGAAGGAA CCGGCCACGG CAAGGCGGAC GAGCTTCTCG GCCGCAAGAA GATCGTGCGC
AAGGTCGTGC TGACGGTGCC GCACTATGTG GCGGTCGGCC ATATCCTGCA CGGCTCCGAC
CTGGTGGCGA CGGTGCCCGA ACGGCTCGCG CAGGCCCTGG CCGAGCCGTT CGACCTGTCC
TATGTGCGCC ATCCTGCCCG GCTGCCCGAG ATTGCGATCA GCCTGTTCTG GCACGGCCGC
TATCACCGGG ATCCCGCCGT GGCGTGGCTG CGCGCCTTGA TCGTGCGGCT TCACGGGGAA
GGTGCGCCCG GCTGA
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| Protein sequence | MELKDIDLNL LVVFNQLLID RRVSKVAANL GLSQPGVSNA LARLRKLTDD PLFLRTPKGM
EPTPFAEQLA APTASALQTI HAAINQRSSF DPATSARAFT IGMTDIGEIY FLPKLMQELA
RVAPGLSIST VRNTAVNLQD EMESGHVTLA IGLLPQLKSG YFQRRLFKQH YVCMFRRGHA
LDKRQISLAE FSRADHVVVV SEGTGHGKAD ELLGRKKIVR KVVLTVPHYV AVGHILHGSD
LVATVPERLA QALAEPFDLS YVRHPARLPE IAISLFWHGR YHRDPAVAWL RALIVRLHGE
GAPG
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