Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5341 |
Symbol | |
ID | 7975802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 44941 |
End bp | 46125 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795935 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_002947209 |
Protein GI | 239820024 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACG ATATCGTGAT CGTGGCCGCG CAACGCACGG CAGTCGGCAA GTTCGGCGGC GCGCTGGCCG GCACGGCCGC ACCGGAACTG GGCGCGCACG TGGTGAAGGG GCTGCTCGAG AAAGCCGGCG TGCCGGGCGA TGCGGTGTCC GAGGTGATCA TGGGCCAGGT GCTCGCGGCC GGCGCGGGGC AAAACCCGGC GCGGCAGACG GTCATCAAGG CAGGCCTGCC CATCGGCGTG CCGGGCCTCA CCATCAACAA GGTCTGCGGC TCGGGCCTGA AAGCCGTGAT GCTCGCGGCG CAGGCCGTGA AGTGCGGCGA CGCCGAGATC GTCGTGGCCG GCGGCCAGGA GAACATGAGC CTGGCGCCGC ACGTGCTGCC CAACTCGCGC AACGGCCAGC GCATGGGCGA CTGGAAGCTG GTCGACACCA TGATCGTGGA CGGCCTGTGG GACGTCTACA ACCAGTACCA CATGGGCACC ACGGCCGAGA ACGTGGCAAA GAAGTACGGC ATCACGCGCG AGATGCAGGA CGCGCTCGCG CTCGCCTCGC AGCAGAAGGC CGCGGCCGCG CAGGATGCGG GGCGCTTCGA CGACGAGATC CTGCTGTTCA GCATCGCGCA GAAGAAGGGC GACCCCATTG TCTTCGCAGC CGACGAGTTC GTGAATCGCA AGACCAACGC CGACGCGCTC GCGGGCCTGC GCCCTGCGTT CGACAAGACG GGCTCGGTGA CGGCCGGCAA TGCTTCGGGC CTGAACGACG GCGCGGCTGC GGTGCTGGTG ATGTCGGCCT CGCGCGCCGC AGCGCTCGGC CTGCAGCCGC TGGCGGTGAT CCGCGCCTAT GCGAGCGCGG GCCTGGACCC GTCGCTCATG GGCATGGGCC CGGTGCCCGC TTCGCAGCTC GCGCTCAAGA AGGCCGGCTG GAAGGCGCAG GACCTCGACC TGATGGAGAT CAACGAAGCC TTCGCGGCCC AGGCCTGCGC GGTCAACTGC GAGATGGACT GGGACACGAG CCGCATCAAC GTGAACGGCG GCGCCATCGC CATCGGCCAC CCCATCGGTG CGTCGGGCTG CCGCGTGCTG GTGACGCTGC TGCACGAGAT GCGCCGCCGC GGCGCCAACA AGGGCCTGGC CTCGCTGTGC ATCGGCGGCG GCATGGGCGT GGCGCTCGCC GTCGAACGCG CTTGA
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Protein sequence | MSDDIVIVAA QRTAVGKFGG ALAGTAAPEL GAHVVKGLLE KAGVPGDAVS EVIMGQVLAA GAGQNPARQT VIKAGLPIGV PGLTINKVCG SGLKAVMLAA QAVKCGDAEI VVAGGQENMS LAPHVLPNSR NGQRMGDWKL VDTMIVDGLW DVYNQYHMGT TAENVAKKYG ITREMQDALA LASQQKAAAA QDAGRFDDEI LLFSIAQKKG DPIVFAADEF VNRKTNADAL AGLRPAFDKT GSVTAGNASG LNDGAAAVLV MSASRAAALG LQPLAVIRAY ASAGLDPSLM GMGPVPASQL ALKKAGWKAQ DLDLMEINEA FAAQACAVNC EMDWDTSRIN VNGGAIAIGH PIGASGCRVL VTLLHEMRRR GANKGLASLC IGGGMGVALA VERA
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