| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5333 |
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| Symbol | |
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| ID | 7975794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 31945 |
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| End bp | 32982 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795927 |
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| Product | Alcohol dehydrogenase GroES domain protein |
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| Protein accession | YP_002947201 |
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| Protein GI | 239820016 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0397204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCCC TTGTCATCCA CGCCCCCGGC GACCTGCGCG TCGAAGAGGT TCCCACGCCT
GAGTTGGGCG CCAATCAGTT GCAGGTGCGC GTGCGCTGCG GGGGCATCTG CGGCTCCGAC
CTGCACTACT ACCAGCACGG CGGCTTCGGC ACCGTGCGCA TCCAGGAACC GATGGTGCTG
GGGCACGAGG TGGCCGGCGT GATCGAGGCC GTCGGTCCGG AGGTGAGCGG CTTTTCAGCT
GGCCAGCGCA TTGCCGTCAG CCCAAGCCGG CCCTGCGGAC TGTGCCGCTT CTGCCAGGAG
GGCCTGCAGA ACCATTGCCT GGACATGCGC TACTACGGCA GTGCCATGCG CAATCCGCAC
GTGCAGGGCG CGTTCCGGCA GCAGATCGTG ATCGACACCC ACCAGGCCCA TCTGCTCGCC
GATCATCTGA GCGATGGCGA GGGCGCGATG GCCGAGCCGC TGTCGGTGGC GCTGCACGGC
GTGCAGCGCG CCGGGCCGCT GCTGGGTCGC AAGGTGCTGG TGACCGGGTG CGGGCCGATC
GGAGCACTGG CGATCATCGC CGCCCGGCGC GCGGGCGCGG CGCACATCGT GGCCACGGAC
ATGGGTGCGC ATCCGTTGAG CAAGGCACTG AAGGTCGGTG CCGACGAGGT CGTCAACATC
GCCGAAGAGC CGGGAGGCCT CGCACGCTTC GCGGCCGACA AGGGCCAGTT CGACGTGCTC
TTCGAAGCCA GCGGCAACGA GCGCGCATTG CGCGGCGCCT TCGAGGTGCT TCGGCCGCGC
GGCATCATCG TGCAACTGGG CCTCGCCGGC GGCGAGATGA CGCTGCCGAT CAACACCATC
GTGGCCAAGG AGTTCGACCT GCGCGGCGTG TTCCGCTTTC ACCAGGAATT CGCCACAGCG
GTCGAGCTGC TGAACAAGGG GCTGGTCGAC GTCAAGCCGC TGATCTCCGC CACGCTGTCG
TACCGCGACT CCGCGCGCGC TTTCGCGCTG GCGGCGGATC GTTCGCAGGC GATGAAGGTG
CTGCTGAACT TCGACTGA
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| Protein sequence | MEALVIHAPG DLRVEEVPTP ELGANQLQVR VRCGGICGSD LHYYQHGGFG TVRIQEPMVL
GHEVAGVIEA VGPEVSGFSA GQRIAVSPSR PCGLCRFCQE GLQNHCLDMR YYGSAMRNPH
VQGAFRQQIV IDTHQAHLLA DHLSDGEGAM AEPLSVALHG VQRAGPLLGR KVLVTGCGPI
GALAIIAARR AGAAHIVATD MGAHPLSKAL KVGADEVVNI AEEPGGLARF AADKGQFDVL
FEASGNERAL RGAFEVLRPR GIIVQLGLAG GEMTLPINTI VAKEFDLRGV FRFHQEFATA
VELLNKGLVD VKPLISATLS YRDSARAFAL AADRSQAMKV LLNFD
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