| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5329 |
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| Symbol | |
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| ID | 7975790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 27804 |
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| End bp | 28952 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795923 |
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| Product | galactonate dehydratase |
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| Protein accession | YP_002947197 |
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| Protein GI | 239820012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCA CCCGCCTGCA TACCTACCGC GTCGCGCCGC GATGGATGTT CCTGAAGATC
GAGACCGACG AGGGCATCAG CGGCTGGGGC GAGCCGGTCA TCGAGGGTCG TGCCCGTACC
GTCGAGGCCG CCGTGCACGA GTTCGGCGAG ACGCTGATCG GCAAGGACCC GGCGCGCATC
AACGATCTCT GGCAGACGAT GTACCGCAGC AACTTCTACC GCGGCGGCGC GATCCTCATG
AGCGCGATCG CTGGTATCGA CCAGGCGCTG TGGGACATCA AGGGCAAGGC GCTCGGCGTG
CCGGTCTACG AGCTGCTGGG CGGCAGGGTG CGCGACCGCA TGAAGGTCTA CAGCTGGGTC
GGCGGCGACC GGCCGGCCGA CATCGTGCAG GACATGCAGC GCCTGCTCGA AGGCGGCATC
GACACCTTCA AGCTGAACGG CTGCGAGGAG ATGGCGCTGC TCGATTCGCC GCGTGCCGTC
GATGCCGCGG TTGCCAAGGT GGCCGCGGTG CGCGACGCGC TGGACATGCG GGTGGACTTC
GGGCTCGACT TCCACGGCCG CGTGGCCGCG CCGATGGCCA AGCCACTGTT GCGCGCGCTC
GAGCCGCTGC GCCCGCTCTT CGTCGAGGAG CCCGTGCTGG CCGAGCAGGC CGAGCACTAT
CCGCGCCTGG CCGCGAGCAC TTCGATTCCG CTCGCGGCAG GCGAGCGCAT GTACTCGCGC
TTCGAGTTCA AGCGGGTTCT GGAGGAGGGC GGCCTCGCCA TCTTGCAGCC CGACCTCTCG
CATGCCGGCG GCATCACCGA ATGCCACAAG ATCGCCGCGA TGGCCGAGGC CTACGACGTG
GCCTTTGCAC CGCATTGCCC GCTAGGACCG GTAGCGCTCG CGGCCTGCCT GCAGGTCGAC
TTCGTGGCGC ACAACGCGGT GCTGCAGGAG CAGAGCATGG GCATCCACTA CAACCGCGGC
GCCGAGCTGC TCGACTACGT GATCAACAAG GACGACTTCC GGATCGATGC GGGCTTCATC
CGTGCCCTGC CCAAGCCGGG CCTCGGCGTG GAAGTCGATG AGGAGCGCAT CGTTCACGCA
AGCCGCAACC CGCCCGATTG GCGCAACCCG GTATGGCGGC ACGCCGACGG GAGCGTGGCC
GAGTGGTAA
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| Protein sequence | MKITRLHTYR VAPRWMFLKI ETDEGISGWG EPVIEGRART VEAAVHEFGE TLIGKDPARI
NDLWQTMYRS NFYRGGAILM SAIAGIDQAL WDIKGKALGV PVYELLGGRV RDRMKVYSWV
GGDRPADIVQ DMQRLLEGGI DTFKLNGCEE MALLDSPRAV DAAVAKVAAV RDALDMRVDF
GLDFHGRVAA PMAKPLLRAL EPLRPLFVEE PVLAEQAEHY PRLAASTSIP LAAGERMYSR
FEFKRVLEEG GLAILQPDLS HAGGITECHK IAAMAEAYDV AFAPHCPLGP VALAACLQVD
FVAHNAVLQE QSMGIHYNRG AELLDYVINK DDFRIDAGFI RALPKPGLGV EVDEERIVHA
SRNPPDWRNP VWRHADGSVA EW
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