| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5288 |
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| Symbol | |
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| ID | 7972721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5612346 |
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| End bp | 5613521 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795882 |
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| Product | homoserine O-acetyltransferase |
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| Protein accession | YP_002947156 |
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| Protein GI | 239818246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2021] Homoserine acetyltransferase |
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| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCAC CTCCCTTGGT CGTCACTGCG CAGTCGATGC AGTTCGAAGG CCCGCTGGCC
CTGCGCAGCG GCGCGTCGCT CGGCAGCTAC ACGCTCGCCT ACGAAACCTA CGGCACCCTG
AACGCCGAGC GCAGCAACGC GGTGCTGGTG TGCCATGCGC TCAATGCCTC GCACCACGTG
GCCGGCACCT ACGAAGGCCA GGCGCGGTCC GAAGGCTGGT GGGACAACAT GGTGGGCCCG
GGCAAGCCGG TCGACACCGA CCGCTTCTTC GTGATCGGCG TGAACAACCT GGGTTCCTGC
TTCGGCTCCA CCGGCCCGAT GCACGTCGAT CCCGCCACCG GCCGCGTCTA CGGCGCGGAC
TTTCCGGTGG TCACGGTCGA AGACTGGGTC GATGCGCAGG CGGCGCTGCT CGATGCGCTC
GGCATCCGCA CGCTCGCGGC CGTGATGGGC GGCAGCCTGG GCGGCATGCA GGCGCTGTCG
TGGACGCTGC AGTACCCCGA CCGCGTGCGG CATGCCGTGG TGGTGGCCAG CGCCCCCAAC
CTCACGGCCG AGAACATCGC CTTCAACGAG GTGGCGCGCC GCGCCATCGT CACCGACCCC
GACTTCCACG GCGGCCATTT CTACGAGCAC GGCGTGATCC CCAAGCGGGG CCTGCGCATC
GCGCGGATGA TCGGCCACAT CACCTACCTG AGCGACGACG TCATGAACGC GAAGTTCGGC
CGCATCCTGC GCAGCGCGGT CGAGGGCGAG GCGGCGGGGC TCGACTACCG CTATTCCACG
CAGGACGTCG AGTTCCAGAT CGAGAGCTAC CTGCGCTACC AGGGCGACAA GTTCAGCGAA
TACTTCGACG CCAACACCTA CCTGCTGATC ACGCGGGCGC TCGACTACTT CGACCCCGCG
CGTTCGCATG GCGGCAACCT CAGCGCGGCA TTCGCCGGCG CCACGGCCAA GTTCCTGCTC
GTGAGCTTCA AGACCGACTG GCGCTTCTCG CCCGCGCGCA GCCGCGAGCT GGTGAAGGCG
CTGCTGGACA ACCGCCGCAA CGTGAGCTAC GCCGAGATCG ACGCGCCGCA CGGGCACGAC
GCCTTCCTGC TCGACGACGT GCGCTACATG GGCGTGGTGC GCTCCTACTT CGAGCGCGTG
GCGCACGAGA TCCAGGCCGA AGGGAGCGCG TCGTGA
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| Protein sequence | MSSPPLVVTA QSMQFEGPLA LRSGASLGSY TLAYETYGTL NAERSNAVLV CHALNASHHV
AGTYEGQARS EGWWDNMVGP GKPVDTDRFF VIGVNNLGSC FGSTGPMHVD PATGRVYGAD
FPVVTVEDWV DAQAALLDAL GIRTLAAVMG GSLGGMQALS WTLQYPDRVR HAVVVASAPN
LTAENIAFNE VARRAIVTDP DFHGGHFYEH GVIPKRGLRI ARMIGHITYL SDDVMNAKFG
RILRSAVEGE AAGLDYRYST QDVEFQIESY LRYQGDKFSE YFDANTYLLI TRALDYFDPA
RSHGGNLSAA FAGATAKFLL VSFKTDWRFS PARSRELVKA LLDNRRNVSY AEIDAPHGHD
AFLLDDVRYM GVVRSYFERV AHEIQAEGSA S
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