Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5279 |
Symbol | |
ID | 7972712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5604546 |
End bp | 5605010 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795873 |
Product | protein of unknown function DUF937 |
Protein accession | YP_002947147 |
Protein GI | 239818237 |
COG category | [S] Function unknown |
COG ID | [COG3753] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.47453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATGC TCGATTCGGT ACTCGGCCAG GTTCTCGGGG GCGCCGCCCA GCAGCAGCAG CAGCCGCAAG GCGGCGGCAT CGGCGGGCTG GGAGACCTGG GGGGCCTTGC CGGCGCGCTG GGCGGCCTGC TGGCCAACAA CGGCGGCGCG GGCGGCCTGG GAGGGCTGGT CTCGAAATTC GAGCAGGCCG GCATGGGCGA CGTGATCGGC TCCTGGATCG GCAAGGGCGA AAACCAGCCC GTGTCCGGCG GCCAACTGGA GAACGCGCTG GGCAGCGACA CCATCGCCAG CATCGCCTCC AAGCTCGGCA TCAATGCGCA AACGCTGCTG CCCATGCTGG CCACCATGCT GCCGGCCCTG ATCGACCAGC TCACGCCGCA CGGCAAGGTG CCGGAGCAGG GCCTGGACAA CCCGAACGAC CTGCTGGCTA CGCTCGGCGG CCTGCTGCAG AACAGGCAGC CTTGA
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Protein sequence | MGMLDSVLGQ VLGGAAQQQQ QPQGGGIGGL GDLGGLAGAL GGLLANNGGA GGLGGLVSKF EQAGMGDVIG SWIGKGENQP VSGGQLENAL GSDTIASIAS KLGINAQTLL PMLATMLPAL IDQLTPHGKV PEQGLDNPND LLATLGGLLQ NRQP
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