| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5264 |
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| Symbol | |
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| ID | 7972697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5584424 |
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| End bp | 5585782 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795858 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947132 |
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| Protein GI | 239818222 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4222] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGTC CTGCCTCCTT CATCTCTTCT TTCATCGCGC TGGCCGCGGC GTTCGCCTGC
GGCCATGCCG CTGCACAGAC CGCCTTCCCC GCCACGCTCG CGGGCCACGC CGTGCTGCCC
GCGCAAAGCT TCGTCGCTGC GCCCAAGGAC GCGCCCGCCG ACCTGCAGGT GAGCGGCAAG
TTCACCTCGG GCAAGCGCGT GGAGGCGGTG GGCACCATCG AAGGCCTCTC CGGCGGGCGC
GGCACCGGCG TCTCGCTGCC CTTCAAGGGC CAGCCGCTGC AGGGCCACTC GGGCATCAAG
AAGATGGACG ACGGCACGTT CTGGATCCTC ACCGACAACG GCGCCGGCGC CAAGGCCAAC
TCGCCCGACT TCATGCTCTA CCTGAACCAC TACAAGGTGG ACTTCAAGAG CGGCAGGTTC
AACCGCCTGA ACACCATCTT CCTTCACGAC CCGGACAAGA AGGTGCCGTT CCGCATCGTC
CATGAAGGCA CGAAGCAGCG CTACCTGACC GGCTCCGACT TCGACCCCGA GAGCTTCCAG
TTTGCCGGCG GCGCACTGTG GATCGGCGAG GAGTTCGGCC CCTTCCTGAT CAAGGCCGAT
CTGAAGGGCA AGGTGCTCGC GGTGTTCGAC ACCGAGGTCG ACGGCAAGGC CGTGCGCTCG
CCCGACCATC CGGCGCTCAC CACGCCGGGC GCCCCGGGCG GCACGGTCGA TTTCCAGGTC
AAGCGCTCCA AGGGCTTCGA AGGCATGGCG GCCTCGAAGG ACGGCAGCAG GCTCTACGCG
CTGCTCGAAG GCCCGGTGTG GAACGCCGAG GCCAAGGACT ACGAACGTGT CGACGGCAAG
GAAGCGCTGC GCGTGCTGGA GTTCGACGTG GCGTCTGAAA AATGGACCGG CCGCCACTGG
AAGTACCCGC TCGAAGCCAA CGGCCACGCC ATCGGCGACT TCAACATGAT CGACGCGACC
ACCGGGCTGG TCATCGAGCG CGACAATGGC GAAGGCACCA GCGACAAGGC CTGCCCCGAG
GGCCAGAAGC GCAGCGACTG CTTCCACGAC ATCGCCAGGT TCAAGCGCGT CTACAAGATC
GAGCTGAGCG ATGCCAACGT GGGCGGCGCG GTGCGCAAGA TCGGCTACAT CGACCTGCTG
AACATCGCCG ACCCGGCCAG GCTCGCGCGC AAGCCGCTGA ACGACGGCGT GCTCAAGTTC
CCGTTCTTCA CGATCGAGAA CGTCGACGTG GTCGATGCCA CGCACATCGT GGTGGGCAAC
GACAACAACC TGCCGTTCTC CAGCAGCCGC GAGCCCAACA AGGCGGACGA CAACGAGCTG
GTGCTGCTCG AAGCCGGCGC GCTGCTGCAG GCCAGGTAG
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| Protein sequence | MTRPASFISS FIALAAAFAC GHAAAQTAFP ATLAGHAVLP AQSFVAAPKD APADLQVSGK
FTSGKRVEAV GTIEGLSGGR GTGVSLPFKG QPLQGHSGIK KMDDGTFWIL TDNGAGAKAN
SPDFMLYLNH YKVDFKSGRF NRLNTIFLHD PDKKVPFRIV HEGTKQRYLT GSDFDPESFQ
FAGGALWIGE EFGPFLIKAD LKGKVLAVFD TEVDGKAVRS PDHPALTTPG APGGTVDFQV
KRSKGFEGMA ASKDGSRLYA LLEGPVWNAE AKDYERVDGK EALRVLEFDV ASEKWTGRHW
KYPLEANGHA IGDFNMIDAT TGLVIERDNG EGTSDKACPE GQKRSDCFHD IARFKRVYKI
ELSDANVGGA VRKIGYIDLL NIADPARLAR KPLNDGVLKF PFFTIENVDV VDATHIVVGN
DNNLPFSSSR EPNKADDNEL VLLEAGALLQ AR
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