| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5228 |
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| Symbol | |
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| ID | 7969887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5549678 |
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| End bp | 5550466 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795822 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002947096 |
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| Protein GI | 239818186 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.860524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCCG GTGAAGAATC GCCCCTGGCG CATACCAATG ACGAGACAAG CAACATGGCA
ACTTCCACAC TTTCTCCTCC TCCTCCTGCT GCCGACGCGG CTTTGTTCGA ATCGGTCGAG
TCGACCGACC TCGTCGGGCT GGTCGAGGCC CAGCTGACGC GCGCCATCGT CGAAGGGCGC
CTGGCACCCG GCAGCCGCAT CGTCGAAGCC GACATCGCGC GCCGCATGGG CGTGAGCCGC
GCGCCCGTGC GCGAGGCGGC GCGGCGGCTC GAGCGTCAGG GCGTGCTGGT CGCCAAGCCG
CGCCACGGCT TCGCGGTGCG GACCATCAGC GTGCAGGAGA TCGACGACCT GTTCGAAGTG
CGCCTGAGCC TCGAGCTGAC TTCGATCGAG CTGGCCTGCC GCAAGGCCGA CGACGCCGGC
ATCGCGCGCG TGCAGGCGCT GGTCGAGGCC ATGGTGCGCG AGGCCAACAC GCAGCCGCAG
CACCACCGCA TCGCCAACGA CCTGGCGCTG CACACGCTGA TCTGCGAGCT GTCGGGCAAC
GCGCACCTGC ACCGCATCTT CATGAACACG CAGACCGAGA TGCAGATGAT CATCGCGCTG
ATCGACGCGG TCTACCACGA CCCCACCGCC ATGGCCGAGA CCCACCGCCC CATCGTCGAC
GCCCTGGTGC GCCGCGACCC CGAGGCCGCC AAGGCCGCGA TGCGCGTGCA CCTGGAAGAC
GCCTGGCAGC ACGTGCGCGC GCTGTTCGTC AAGCAGCACG GCGCCGCGCC CCTTCCCGCC
AATGCCTGA
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| Protein sequence | MPSGEESPLA HTNDETSNMA TSTLSPPPPA ADAALFESVE STDLVGLVEA QLTRAIVEGR
LAPGSRIVEA DIARRMGVSR APVREAARRL ERQGVLVAKP RHGFAVRTIS VQEIDDLFEV
RLSLELTSIE LACRKADDAG IARVQALVEA MVREANTQPQ HHRIANDLAL HTLICELSGN
AHLHRIFMNT QTEMQMIIAL IDAVYHDPTA MAETHRPIVD ALVRRDPEAA KAAMRVHLED
AWQHVRALFV KQHGAAPLPA NA
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