Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5151 |
Symbol | |
ID | 7971522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5466649 |
End bp | 5468916 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795745 |
Product | protein of unknown function DUF839 |
Protein accession | YP_002947019 |
Protein GI | 239818109 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAA ACACCCGTAC CGACGACAAC GGCATCGATC TTGACGACGT TGGCACCAAT CCCACTGCGA ACCCCTCATT CACCGACCTG ATCGCTTCGC GCCTCAGCCG TCGCCATCTG TTCGGCCTGG GCGTCGGCAC CGCCGGCACC GCGCTGCTGC AGGCGTGCGG CGGCGGTGGC GGCGGCGGCA CGGCTTTCCC GATCATTCCG CCCGCACCGG CACCCGCTCC CGCTCCCGCG CCGGCGCCTG CACCGACCCC CGCACCGGCG CCCACGCCGA TGAAGCTCGG CTTCAATGCC GTGGCCAAGG GCCTGGCCGA CGTGGTCACC GTGCCCGCCG GCTACACCGC CAGCGTGCTC TATCGCCTGG GCGACCCGAT CGCCGCGGGC GTGGCCGCCT ACAAGAACGA CGGCACCGAC GATCCGGCCA CCTACGACCG GCGCGCCGGC GACCACCACG ACGGCATGAC CTTCTTCGGC ATGAACGCGT CGAACAAGTG GGACGCCGCC AACGCGTCGC GCGGCCTGCT CGTGATGAAT CACGAAGCCA TCACGCCGCT GTTCCTGCAC CCCGCCGGCC AGACCATCAG CGGCACCGGC AATGCGGCGG TGCGCACCTC CGCCGACGAA GTGCTGCGCG AGTTCTACCT GCACGGCGTG AGCGTGATCG AGATCAACAA GAGCGGCAGC GCCTGGAGCT ACAAGCAGGA CTCGAGCTTC AACCGCCGCG TCCACACGCT GACCGAAATG GCGTTCTCGG GCCCCGCCGC CAAGACCGAC TACCTGAAGA CCAAGTACTC GACCGACGGC AGCAAGACCC GCGGCACGCT CAACAACTGC GCCAACGGCA CCACGCCCTG GGGCACCTAC CTGACCTGCG AAGAAAACTG GGCCGGCTAT TTCCGCCGCA TCAAGGCCAC CGACGACCCC AGCCGCACGG CGAAGGAAAT CGCCGCGTTC ACCCGCTACG GCGTGGCCAG CACCGGCCGC GAACTCTGGG CCACCGTCAC GCCCGACACG GCCGACAACC TCTATGGCCG CTGGAACGCC CAGGTGGTCG GCGCCACCGC CACCGACGAC TTCCGCAACG GCGCCAACAC CTACGGCTGG GTGGTCGAGA TCGATCCCTT CAACCCCGCC AGCACCCCCA AGAAGCGCAC CGCGCTCGGC CGCTTCGGCC ATGAAGGCGC CTGCCTCGGC CCGGTCGTGG TCGGCAAGCC GCTGGTCTGG TACATGGGCG ACGACTCGCG CAACGAGTAC ATCTACAAGT TCGTCTCGAC GAAGAACTGG GATGCGGCCG ACGTGGGCGG CGGCACCGCG GCCGGCGACA AGTACATGGA CGACGGCCGC CTCTACGTGG CCAAGTTCAA CGCCGACGGC ACCGGCGCGT GGCTCGAGCT GAAGCTCGGC GTGAACAACA TCACCGCGAG CAATCCGGCC TACGCCTTTG CCGATGCCGC CGACGTGGTG GTCAATGTGC GCCTCGCGGC CGACGCCGCC GGCGCCACAA GGATGGACCG CCCCGAGTGG ACGGCCGTCA ACCCGAAGAC CGGCGAGGTC TACGTCACCC TCACCAATAC CAACGCCGCA TCGCGCCCCA TCACCGCCAC CGACGGCGCC AACCCGCGCT TCTACAACGA CCCCAAGGGC CCCACCGCCA CCGCGCAGAC CGGCAACCCC AACGGCCACA TCGTGCGCTT TGCGGACGAG GGCGGCGACC CCGCCGCGCT GGCCTTCAAG TGGGACGTGT ACCTGTTCGG CGCGCGCGCC ACCGCCTCGG CCGACATCAA CGTGTCGCAA CTGAGCGCCG ACAACGACTT CTCCAGCCCC GACGGCATGT GGTTCAGCCA CGCCACCGCC GGCCTGCTCT GGCTGGAGAC CGACGACGGC GCCTACACCG ACGTCACCAA CTGCATGCTG CTGGCCGCGC TGCCGGGCAA GGTCGGCGAC GGCGGCGCCA GGACCATCAC CAACGTCGAC GGCGCCACCA CGCGCACGCA GGACACCTTC GTGGGCAAGG CGCCCGGCGC CGACGGCCTG CGCCGCTTCC TGGTCGGCCC GAAGGATTGC GAGATCACCG GCATTGCCGA GTCGGGTGAC GGCCGCGCGC TGTTCGTGAA CATCCAGCAT CCGGGCGAAA CCACTCCCGC GGCGAGCATC GGCGACCCGA CCAAGTTCGG CAGCCATTGG CCCGAAGGCG GCAGCGCCCG CCCGCGCTCG GCCACGGTGG TCATCACCAG GGACGACGGC GGCCTGATCG GCCTCTGA
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Protein sequence | MTANTRTDDN GIDLDDVGTN PTANPSFTDL IASRLSRRHL FGLGVGTAGT ALLQACGGGG GGGTAFPIIP PAPAPAPAPA PAPAPTPAPA PTPMKLGFNA VAKGLADVVT VPAGYTASVL YRLGDPIAAG VAAYKNDGTD DPATYDRRAG DHHDGMTFFG MNASNKWDAA NASRGLLVMN HEAITPLFLH PAGQTISGTG NAAVRTSADE VLREFYLHGV SVIEINKSGS AWSYKQDSSF NRRVHTLTEM AFSGPAAKTD YLKTKYSTDG SKTRGTLNNC ANGTTPWGTY LTCEENWAGY FRRIKATDDP SRTAKEIAAF TRYGVASTGR ELWATVTPDT ADNLYGRWNA QVVGATATDD FRNGANTYGW VVEIDPFNPA STPKKRTALG RFGHEGACLG PVVVGKPLVW YMGDDSRNEY IYKFVSTKNW DAADVGGGTA AGDKYMDDGR LYVAKFNADG TGAWLELKLG VNNITASNPA YAFADAADVV VNVRLAADAA GATRMDRPEW TAVNPKTGEV YVTLTNTNAA SRPITATDGA NPRFYNDPKG PTATAQTGNP NGHIVRFADE GGDPAALAFK WDVYLFGARA TASADINVSQ LSADNDFSSP DGMWFSHATA GLLWLETDDG AYTDVTNCML LAALPGKVGD GGARTITNVD GATTRTQDTF VGKAPGADGL RRFLVGPKDC EITGIAESGD GRALFVNIQH PGETTPAASI GDPTKFGSHW PEGGSARPRS ATVVITRDDG GLIGL
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