| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5141 |
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| Symbol | |
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| ID | 7971512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5454763 |
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| End bp | 5455962 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795735 |
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| Product | Amidohydrolase 3 |
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| Protein accession | YP_002947009 |
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| Protein GI | 239818099 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG AGTCGCTGCG CATTCCGTCG CGGCTGCGCG GCTTTGCCGC GGGCGATGCC
CAGGTCTTCG ACGTCACGCT GGCCGGCGAC AGGGTGCAGG CCGTCGCGCC GAGCGCATCG
CAGTCGCAGG CGCGCGGCAC CTTGCTGAGC GCGCTCGTCG AGGCGCATGC GCACATCGAC
AAGAACTACA CCGTGCAGGA AGTCGGCGCG GCCGAGGGCA ACCTGTTCGC GGCCATCGAC
CGCATGGCGA AGCACCGCGC GGGCTGGAGC GGCCAAACGC TGCGCCCGCG CATGGAGCGC
GCGCTGCACG AGGCCTGGCA GTCGGGCACG CGCGCGCTGC GCACCCACAT CGACTGGGTG
GAGGGCGAGC CGCCCGCCGC GCTGGCGGTG TTCGAGGCGC TGCGCGAAGA GTGGCGCGGC
CGCATCGAGC TGCAGTTCGT CTCTCTCACG CCGCTCGACC TGTTCGCGGA CCTCGCGGCC
GGCGAGCGCA TTGCGCGCGA GGTGAAGCGC GCGGGCGGCG TGCTGGGCGC CTTCGTGTAT
CGCAACGAAG GCCTGGTGCA CAAGCTGGGC CGCGTGTTCG ACCTCGCGCA GGACCACGGC
CTGGGCCTCG ACTTCCATGT CGACGAAGGG CTCGACGCCG ATGCGAGCGG CCTGCGCAGC
ATTGCGCAGC TGATGCGTGC GCGCGACTTC CGGCGCGGCG TGGTCTGCGG CCACTGCTGC
TCGCTGGCGA TGCAGGACGA TGCCGTTGCC AACGAAACGC TGGCGCTGTG CGCGGGCGCC
GGCATCCACA TCGTCGCGCT GCCGACCACC AACCTCTACC TGCAGGGCGC CTGGGACCGC
ACGCCCGTGC CGCGCGGCAT CACGCGCATC CACGAGGCGG CGGCACGGGG CTTGCGTGCG
AGCCTGGCCA CGGACAACGT GCAGGACGCC TTCTATCCCT ATGGCAGCTA CGACCTTCTC
GAAACCTTCG GCCTCGGTGT GCAGATGGCG CACCTCGCGC CCGCGGAAGA ATGGCTCGAC
GCGATCACCG TCAGCCCCGC GAAGGCGCTC GGCCTGGCAT GGGACGGCCG CATTGCGCCG
GGCTGCCCCG CGGACCTGGT GCTGCTCGCG GCCACCGGCG AGCATGAGCT GGTCGGCCCG
CGCGGGCGCC GACGCACCGT GATCCGTGGC GGTCAAGAAA TTCTGGAGCA GACACGATGA
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| Protein sequence | MKLESLRIPS RLRGFAAGDA QVFDVTLAGD RVQAVAPSAS QSQARGTLLS ALVEAHAHID
KNYTVQEVGA AEGNLFAAID RMAKHRAGWS GQTLRPRMER ALHEAWQSGT RALRTHIDWV
EGEPPAALAV FEALREEWRG RIELQFVSLT PLDLFADLAA GERIAREVKR AGGVLGAFVY
RNEGLVHKLG RVFDLAQDHG LGLDFHVDEG LDADASGLRS IAQLMRARDF RRGVVCGHCC
SLAMQDDAVA NETLALCAGA GIHIVALPTT NLYLQGAWDR TPVPRGITRI HEAAARGLRA
SLATDNVQDA FYPYGSYDLL ETFGLGVQMA HLAPAEEWLD AITVSPAKAL GLAWDGRIAP
GCPADLVLLA ATGEHELVGP RGRRRTVIRG GQEILEQTR
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