| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5110 |
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| Symbol | |
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| ID | 7971481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5421685 |
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| End bp | 5422425 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795704 |
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| Product | AzlC family protein |
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| Protein accession | YP_002946978 |
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| Protein GI | 239818068 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0256895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCTTT CCGCAGCCAT TCGCCGCCGC CCCGAATTCC GCGCCGGCAT CCGCGACATG
TCCTCGGCCG CGCTGGGCAT CGGCGCCTGG GGCCTGATGA CCGGCGTGGC CATGGTCAAG
TCGGACATGA GCGTGCTGGA GTCGGTGGCC ATGACGCTGC TGGTCTACGC CGGCAGCTCC
CAGCTCGCGG CCATTCCGCT GCTGTTCGCG GGCGCGCCGG CCTGGGTGAT CCTGGCCACG
GGCTTTTGCG TCAACCTGCG CTTCGTGGTC TTCAGCCTGC ACCTGCGGCC CTACCTCATG
CACATGCCGC GCTGGCGCCG CATGACGCAC GGCTACCTGA CGGCCGACCT GAGCTATGCG
CTCTTCACCC GGCAGTACGC GACGCCGCCG GCCACCATCG CCGAGCAGCA GTCGCAGGAG
GCCTATCTCA CCGGCAACTA CTTCGTGACC TGGTGCTCCT GGATGGGCAT GAGCCTGCTG
GGCATTGCGC TGGCCAATTT CATTCCGCAG AGCTGGGGCC TGGGCTTTGC CGGCGTGCTG
AGCCTGGTGG CGATCGTCTG CTCGATGGCC ACCACGCGGC TGCGCGTGCT GGCCGCGCTG
GTCGCCAGCG CCACCGCGGT GGCCGCCTAT GCCTTGCCGC TCAAGCTCAA CATCGTCGTG
GCCATCGGCG CCGCGGTGCT GCTGTGCTTC TGGCTCGAGA AGCGGTTCGG GCTCGACCCC
GACGCGGAGG ACGACAAGTG A
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| Protein sequence | MFLSAAIRRR PEFRAGIRDM SSAALGIGAW GLMTGVAMVK SDMSVLESVA MTLLVYAGSS
QLAAIPLLFA GAPAWVILAT GFCVNLRFVV FSLHLRPYLM HMPRWRRMTH GYLTADLSYA
LFTRQYATPP ATIAEQQSQE AYLTGNYFVT WCSWMGMSLL GIALANFIPQ SWGLGFAGVL
SLVAIVCSMA TTRLRVLAAL VASATAVAAY ALPLKLNIVV AIGAAVLLCF WLEKRFGLDP
DAEDDK
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