| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5099 |
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| Symbol | |
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| ID | 7971470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5410992 |
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| End bp | 5412008 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795693 |
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| Product | 1-aminocyclopropane-1-carboxylate deaminase |
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| Protein accession | YP_002946967 |
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| Protein GI | 239818057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | [TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGA AGAAATTCCC GCGCCACGCG CTCACCTTCG GCCCCACGCC GATCCATCCC
CTCAAGCGCC TGAGCGCCCA CCTGGGCGGC GAGGTCGAGC TCTACGCCAA GCGCGAGGAC
TGCAACAGCG GCCTGGCCTT CGGCGGCAAC AAGACGCGCA AGCTCGAATA CCTGATTCCC
GAGGCGCTCG AGGGCGGCTA CGACACGCTG GTGTCGATCG GCGGCATCCA GTCGAACCAG
ACGCGCCAGG TGGCGGCGGT GGCCGCGCAC CTGGGCCTGA AGTGCGTGCT GGTGCAGGAG
AACTGGGTCA ACTATTCCGA TGCGGTGTAC GACCGCGTCG GCAACATCGA GATGTCCCGC
ATCATGGGCG CCGATGTGCG GCTGGACAGC GCGGGCTTCG ACATCGGCAT CCGCAAGAGC
TGGGAAGAAG CCATGGCCGA CGTGCGCAAG GCCGGCGGCA AGCCCTTTCC GATTCCGGCC
GGCTGCTCGG AGCATCCGCG CGGCGGCCTG GGCTTCGTCG GCTTTGCCGA GGAAGTACGG
CAGCAGGAGG CCGAGCTGGG CTTCAAGTTC GACTACATCG TGACCTGCTC GGTCACGGGC
AGCACGCAGG CCGGCATGGT GGTGGGCTTT GCGGCCGACG GCCGGGCCGA CCGCGTGATC
GGCATCGACG CCTCGGCCAA GCCCGAGCAG ACCTTCGCGC AGATCGTGCG CATTGCCAAG
GGCACGGCCG AGCTGGTCGA GCTGGGCCGC GACATCACCG ACAAGGACGT GGTGCTCGAC
CGCCGCTTCG GCGGACCAGA ATACGGCCTG CCCAACGAAG GCACGCTGGA ATCGATCCGC
CTCTGCGCGC GCCTGGAAGG CATGCTGACC GACCCCGTGT ACGAGGGCAA GTCGATGCAC
GGGATGATCG AGAAGGTGCG CCTGGGCGAA TTCCCGGCCG GCTCGAAGGT GCTCTATGCG
CACCTGGGCG GCGTGCCTGC GCTGAACGCC TACAGCTTCC TGTTCAGGAA CGGCTGA
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| Protein sequence | MNLKKFPRHA LTFGPTPIHP LKRLSAHLGG EVELYAKRED CNSGLAFGGN KTRKLEYLIP
EALEGGYDTL VSIGGIQSNQ TRQVAAVAAH LGLKCVLVQE NWVNYSDAVY DRVGNIEMSR
IMGADVRLDS AGFDIGIRKS WEEAMADVRK AGGKPFPIPA GCSEHPRGGL GFVGFAEEVR
QQEAELGFKF DYIVTCSVTG STQAGMVVGF AADGRADRVI GIDASAKPEQ TFAQIVRIAK
GTAELVELGR DITDKDVVLD RRFGGPEYGL PNEGTLESIR LCARLEGMLT DPVYEGKSMH
GMIEKVRLGE FPAGSKVLYA HLGGVPALNA YSFLFRNG
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