| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5084 |
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| Symbol | |
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| ID | 7971455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5396834 |
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| End bp | 5397376 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795678 |
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| Product | ribosomal-protein-alanine acetyltransferase |
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| Protein accession | YP_002946952 |
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| Protein GI | 239818042 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0456] Acetyltransferases |
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| TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCG TCCTCCAGCC CGTCGAAGCC CGCCTCGAGC CGCTCACCGT CGAGCGGCTC
GATGCCGTCT GCGCGGTCGA GCAGACGGCC TACAGCCATC CGTGGACGCG GGCCAACTTC
ATCGATTCGA TGGCGGTCGG CTACCACTGC CAGTGCCTGC TGGCCCCGGT TTCGCGGCCC
GACCTGGGCA CGCCGCTCAC CAGCCTGGGC GAGACGCTGA TCGGCTACTT CGTCGCCATG
AAGGGCGTGG ACGAAGTGCA CCTGCTCAAC ATCACCGTGG CGCCGGCCTT CCAGCGCCAG
GGCTGGGCGC CGCTGATGCT CGAGGCGCTG ACCGGCTGGT CGCGCGCGCA GGGCGCGCAG
TGGCTCTGGC TCGAGGTGCG CCAGAGCAAC CGGCGCGCGC TCGACATCTA CATGCGCCAG
GGATTCCGCA GCGTGGGCGT GCGCAAGGGC TACTACCCGG CGCATGAAGG CAAGCGCGAG
GACGCGGTGG TCATGAGCCT GCGATTGAAC GAATCAGGCT CTGCCTGGGG AGCCTTGCGA
TGA
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| Protein sequence | MSAVLQPVEA RLEPLTVERL DAVCAVEQTA YSHPWTRANF IDSMAVGYHC QCLLAPVSRP
DLGTPLTSLG ETLIGYFVAM KGVDEVHLLN ITVAPAFQRQ GWAPLMLEAL TGWSRAQGAQ
WLWLEVRQSN RRALDIYMRQ GFRSVGVRKG YYPAHEGKRE DAVVMSLRLN ESGSAWGALR
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